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XBB.2.6 sublineage with S:P521S and Orf9b:P51Q circulating in Peru'/Chile/Brazil/USA 110 seqs >20% of prevalence in Peru' after April 1st. #1

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FedeGueli opened this issue May 6, 2023 · 1 comment
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XBB.2.6 sublineage with S:P521S and Orf9b:P51Q circulating in Peru'/Chile/Brazil/USA 110 seqs >20% of prevalence in Peru' after April 1st. #1

FedeGueli opened this issue May 6, 2023 · 1 comment
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designated To be proposed Green light for proposal
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XBB.2.6.1 GH.1

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@FedeGueli
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From cov-lineages/pango-designation#1869 now closed

Defining mutations:
XBB.2.6 >> > S:P521S (C23123T) > T6895C, T9148C, A15192C, Orf9b:P51Q (C28435A )

Gisaid query: T9148C, A15192C, C28435A

Sequences: 7 (2 Chile, 2 Peru, 3 Us )
EPI_ISL_17168346, EPI_ISL_17271459, EPI_ISL_17286697,
EPI_ISL_17401628, EPI_ISL_17405026, EPI_ISL_17405045,
EPI_ISL_17411947

https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_20860_55bed0.json?c=userOrOld&label=id:node_6126969

Schermata 2023-05-06 alle 19 05 39
@FedeGueli
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it reached 110 sequences representing 31 out of 132 sequences uploaded from peru after 1st April.

@corneliusroemer i would reopen the original issue for a rapid review and eventually designation

@FedeGueli FedeGueli changed the title XBB.2.6 sublineage with S:P521S and Orf9b:P51Q circulating in Peru'/Chile/Brazil/USA 27 seqs XBB.2.6 sublineage with S:P521S and Orf9b:P51Q circulating in Peru'/Chile/Brazil/USA 110 seqs May 12, 2023
@FedeGueli FedeGueli added the To be proposed Green light for proposal label May 12, 2023
@FedeGueli FedeGueli changed the title XBB.2.6 sublineage with S:P521S and Orf9b:P51Q circulating in Peru'/Chile/Brazil/USA 110 seqs XBB.2.6 sublineage with S:P521S and Orf9b:P51Q circulating in Peru'/Chile/Brazil/USA 110 seqs >20% of prevalence in Peru' after April 1st. May 12, 2023
@ryhisner ryhisner mentioned this issue Dec 14, 2023
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@xz-keg xz-keg modified the milestones: XBB.2.6.1, XBB.2.6.1 GH.1 Dec 17, 2023
@AngieHinrichs AngieHinrichs mentioned this issue Apr 23, 2024
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@ryhisner ryhisner mentioned this issue Jun 28, 2024
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