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fix
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sanjaynagi committed Oct 31, 2024
1 parent 1dba3b3 commit 7647b37
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion workflow/scripts/AncestryInformativeMarkers.py
Original file line number Diff line number Diff line change
Expand Up @@ -38,7 +38,7 @@

# read in and filter data
path = f"results/variantAnalysis/vcfs/{dataset}.{contig}.vcf.gz"
vcf, geno, acsubpops, pos, depth, snpeff, subpops, pops = rnaseqpop.readAndFilterVcf(path=path,
vcf, geno, acsubpops, pos, alts, depth, snpeff, subpops, pops = rnaseqpop.readAndFilterVcf(path=path,
contig=contig,
samples=metadata,
ploidy=ploidy,
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