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Y24-265 - RNA FFPE pipeline #2004

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Y24-265 - RNA FFPE pipeline #2004

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@BenTopping BenTopping commented Oct 17, 2024

Changes proposed in this pull request

  • Adds RNA FFPE pipeline
  • Adds RNA FFPE required robots
  • Adds RNA FFPE required purposes.

Notes

There is an associated PR in the integration suite for the RNA FFPE spec.

Sequencescape PR: sanger/sequencescape#4415

@BenTopping BenTopping linked an issue Oct 17, 2024 that may be closed by this pull request
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codecov bot commented Oct 17, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 77.97%. Comparing base (81b25ef) to head (3a9deb7).
Report is 8 commits behind head on develop.

Additional details and impacted files
@@             Coverage Diff             @@
##           develop    #2004      +/-   ##
===========================================
- Coverage    77.97%   77.97%   -0.01%     
===========================================
  Files          463      463              
  Lines        17706    17708       +2     
  Branches       225      225              
===========================================
  Hits         13807    13807              
- Misses        3897     3899       +2     
  Partials         2        2              
Flag Coverage Δ
javascript 69.68% <ø> (-0.02%) ⬇️
pull_request 77.97% <ø> (?)
push 77.97% <ø> (ø)
ruby 91.16% <ø> (ø)

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codeclimate bot commented Oct 18, 2024

Code Climate has analyzed commit 3a9deb7 and detected 0 issues on this pull request.

The test coverage on the diff in this pull request is 100.0% (50% is the threshold).

This pull request will bring the total coverage in the repository to 91.1% (0.0% change).

View more on Code Climate.

@BenTopping BenTopping marked this pull request as ready for review October 18, 2024 10:55
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Y24-265 - New LIMS pipeline for FFPE RNA sample processing
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