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JOSS Review 1 #41
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Hello Thibault, Thank you very much for the review ! Best regards, |
Hi @ThibaultMarzullo, as per your recommendations, many improvements have been made to the paper (see #47 and c2823b3 ) and the documentation (see #62). The documentation has been thoroughly upgraded with examples of workflows. All relevant packages and methods are also documented. |
Hi @samuelduchesne and @louisleroy5 , I have 2 additional suggestions for the paper. They are just small changes and English is not my first language, so I might be very wrong!
Regardless of my last 2 comments, this issue can be closed. |
Comments handled by f98fedb |
Hi Samuel and Louis, this issue relates to the JOSS review of your paper. Here are the detailed comments mentioned in the review page.
Paper summary:
I would suggest writing just a few words to give more high-level context to the non-expert, for example:
All of that could fit in 3-4 sentences, no need to give over-detailed explanations.
Misc comments on the paper:
Documentation:
Generally speaking it seems incomplete: there are examples for using the E+ to UMI conversion, E+ to TRNBuild, but it is very vague on using archetypal as a simulation environment, the modification of UMI Templates is not covered by examples, the "getting started" section is left blank and the tutorials are incomplete or blank.
The user is left to finding out on their own how to use archetypal for any task other than converting models.
You seem to have done a great deal of work, nevertheless some more work on the documentation is in my opinion necessary if You wish to release the software.
Let me know what are your thoughts on these comments.
Kind regards
Thibault
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