Merge pull request #19 from rsquaredacademy/develop

On CRAN
rsquaredacademy · Feb 28, 2019 · 2b7719c · 2b7719c
2 parents 98f9f17 + 494cd3e
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: xplorerr
 Type: Package
 Title: Tools for Interactive Data Exploration
-Version: 0.1.0.9000
+Version: 0.1.1
 Authors@R: person("Aravind", "Hebbali", email = "[email protected]", role = c("aut", "cre"),
     comment = c(ORCID = "0000-0001-9220-9669"))
 Description: Tools for interactive data exploration built using 'shiny'. Includes apps for descriptive 
@@ -10,7 +10,9 @@ Description: Tools for interactive data exploration built using 'shiny'. Include
 Depends:
     R(>= 3.2.4)
 Imports:
-    shiny
+    magrittr,
+    shiny,
+    utils
 Suggests:
     blorr,
     descriptr,

diff --git a/NAMESPACE b/NAMESPACE
@@ -7,3 +7,8 @@ export(app_logistic_regression)
 export(app_rfm_analysis)
 export(app_vistributions)
 export(app_visualizer)
+importFrom(magrittr,"%>%")
+importFrom(magrittr,extract)
+importFrom(utils,install.packages)
+importFrom(utils,menu)
+importFrom(utils,packageVersion)
diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,10 @@
+# xplorerr 0.1.1
+
+This is a patch release to fix bugs.
+
+- Check suggested packages ([#14](https://github.com/rsquaredacademy/xplorerr/issues/14))
+- Screening error ([#16](https://github.com/rsquaredacademy/xplorerr/issues/16))
+
 # xplorerr 0.1.0
 
 First release

diff --git a/R/launch.R b/R/launch.R
@@ -7,6 +7,28 @@
 #' @export
 #'
 app_visualizer <- function() {
+
+	check_suggests(shiny)
+	check_suggests(shinyBS)
+	check_suggests(shinythemes)
+	check_suggests(descriptr)
+	check_suggests(dplyr)
+	check_suggests(ggplot2)
+	check_suggests(plotly)
+	check_suggests(rbokeh)
+	check_suggests(highcharter)
+	check_suggests(purrr)
+	check_suggests(tidyr)
+	check_suggests(tibble)
+	check_suggests(readxl)
+	check_suggests(readr)
+	check_suggests(jsonlite)
+	check_suggests(magrittr)
+	check_suggests(tools)
+	check_suggests(lubridate)
+	check_suggests(scales)
+	check_suggests(stringr)
+
   message('Highcharts (www.highcharts.com) is a Highsoft software product which is not free for commercial and Governmental use')
   shiny::runApp(appDir = system.file("app-visualize", package = "xplorerr"))
 }
@@ -20,7 +42,20 @@ app_visualizer <- function() {
 #' @export
 #'
 app_descriptive <- function() {
+
+	check_suggests('descriptr')
+	check_suggests('haven')
+	check_suggests('jsonlite')
+	check_suggests('readr')
+	check_suggests('readxl')
+	check_suggests('shinyBS')
+	check_suggests('shinycssloaders')
+	check_suggests('shinythemes')
+	check_suggests('stringr')
+	check_suggests('lubridate')
+
   shiny::runApp(appDir = system.file("app-descriptr", package = "xplorerr"))
+
 }
 
 #' @title Visualize distributions
@@ -32,7 +67,14 @@ app_descriptive <- function() {
 #' @export
 #'
 app_vistributions <- function() {
+
+	check_suggests('vistributions')
+	check_suggests('shinyBS')
+	check_suggests('shinycssloaders')
+	check_suggests('shinythemes')
+
   shiny::runApp(appDir = system.file("app-vistributions", package = "xplorerr"))
+
 }
 
 
@@ -45,7 +87,21 @@ app_vistributions <- function() {
 #' @export
 #'
 app_inference <- function() {
+
+	check_suggests('inferr')
+	check_suggests('descriptr')
+	check_suggests('jsonlite')
+	check_suggests('haven')
+	check_suggests('lubridate')
+	check_suggests('readr')
+	check_suggests('readxl')
+	check_suggests('shinyBS')
+	check_suggests('shinycssloaders')
+	check_suggests('shinythemes')
+	check_suggests('stringr')
+
   shiny::runApp(appDir = system.file("app-inferr", package = "xplorerr"))
+
 }
 
 #' @title Linear Regression
@@ -57,7 +113,22 @@ app_inference <- function() {
 #' @export
 #'
 app_linear_regression <- function() {
+
+	check_suggests('olsrr')
+	check_suggests('caret')
+	check_suggests('descriptr')
+	check_suggests('jsonlite')
+	check_suggests('haven')
+	check_suggests('lubridate')
+	check_suggests('readr')
+	check_suggests('readxl')
+	check_suggests('scales')
+	check_suggests('shinyBS')
+	check_suggests('shinycssloaders')
+	check_suggests('shinythemes')
+
   shiny::runApp(appDir = system.file("app-olsrr", package = "xplorerr"))
+
 }
 
 #' @title Logistic Regression
@@ -69,7 +140,22 @@ app_linear_regression <- function() {
 #' @export
 #'
 app_logistic_regression <- function() {
+
+	check_suggests('blorr')
+	check_suggests('descriptr')
+	check_suggests('jsonlite')
+	check_suggests('haven')
+	check_suggests('lubridate')
+	check_suggests('readr')
+	check_suggests('readxl')
+	check_suggests('shinyBS')
+	check_suggests('shinycssloaders')
+	check_suggests('shinythemes')
+	check_suggests('stringr')
+	check_suggests('tidyr')
+
   shiny::runApp(appDir = system.file("app-blorr", package = "xplorerr"))
+
 }
 
 #' @title RFM Analysis
@@ -81,7 +167,20 @@ app_logistic_regression <- function() {
 #' @export
 #'
 app_rfm_analysis <- function() {
+
+	check_suggests('rfm')
+	check_suggests('haven')
+	check_suggests('jsonlite')
+	check_suggests('readr')
+	check_suggests('readxl')
+	check_suggests('shinyBS')
+	check_suggests('shinycssloaders')
+	check_suggests('shinythemes')
+	check_suggests('stringr')
+	check_suggests('DT')
+
   shiny::runApp(appDir = system.file("app-rfm", package = "xplorerr"))
+
 }
 
 

diff --git a/R/utils.R b/R/utils.R
@@ -1,12 +1,12 @@
-#' @importFrom utils packageVersion, menu, install.packages
+#' @importFrom utils packageVersion menu install.packages
 check_suggests <- function(pkg) {
-  
+
   pkg_flag <- tryCatch(utils::packageVersion(pkg), error = function(e) NA)
-  
+
   if (is.na(pkg_flag)) {
-    
+
     msg <- message(paste0(pkg, ' must be installed for this functionality.'))
-    
+
     if (interactive()) {
       message(msg, "\nWould you like to install it?")
       if (utils::menu(c("Yes", "No")) == 1) {
@@ -16,7 +16,7 @@ check_suggests <- function(pkg) {
       }
     } else {
       stop(msg, call. = FALSE)
-    } 
+    }
   }
 
 }
diff --git a/R/xplorerr.R b/R/xplorerr.R
@@ -10,4 +10,7 @@
 NULL
 
 ## quiets concerns of R CMD check re: the .'s that appear in pipelines
-if(getRversion() >= "2.15.1")  utils::globalVariables(c("."))
+if(getRversion() >= "2.15.1")  utils::globalVariables(c(".",
+  "descriptr", "dplyr", "ggplot2", "highcharter", "jsonlite", "lubridate",
+  "magrittr", "plotly", "purrr", "rbokeh", "readr", "readxl", "scales",
+  "shiny", "shinyBS", "shinythemes", "stringr", "tibble", "tidyr", "tools"))
diff --git a/R/zzz.R b/R/zzz.R
@@ -1,9 +1,10 @@
+#' @importFrom magrittr %>% extract
 .onAttach <- function(...) {
   if (!interactive() || stats::runif(1) > 0.1) return()
 
   pkgs <- utils::available.packages()
-  
-  cran_version <- 
+
+  cran_version <-
     pkgs %>%
     extract("xplorerr", "Version") %>%
     package_version()
@@ -23,14 +24,14 @@
 
   if (interactive()) {
     if (behind_cran) {
-      msg <- message("A new version of xplorerr is available with bug fixes and new features.")
-      message(msg, "\nWould you like to install it?")
+      msg <- c("A new version of xplorerr is available with bug fixes and new features.")
+      packageStartupMessage(msg, "\nWould you like to install it?")
       if (utils::menu(c("Yes", "No")) == 1) {
         utils::update.packages("xplorerr")
-      } 
+      }
     } else {
       packageStartupMessage(paste(strwrap(tip), collapse = "\n"))
-    }   
+    }
   }
 
 }
diff --git a/README.Rmd b/README.Rmd
@@ -17,10 +17,8 @@ knitr::opts_chunk$set(
 > Tools for interactive data analysis 
 
 [![CRAN_Status_Badge](https://www.r-pkg.org/badges/version/xplorerr)](https://cran.r-project.org/package=xplorerr)
-[![cran checks](https://cranchecks.info/badges/summary/xplorerr)](https://cran.r-project.org/web/checks/check_results_xplorerr.html) [![Travis-CI Build Status](https://travis-ci.org/rsquaredacademy/xplorerr.svg?branch=master)](https://travis-ci.org/rsquaredacademy/xplorerr)
-[![AppVeyor Build Status](https://ci.appveyor.com/api/projects/status/github/rsquaredacademy/xplorerr?branch=master&svg=true)](https://ci.appveyor.com/project/rsquaredacademy/xplorerr) 
-[![](https://cranlogs.r-pkg.org/badges/grand-total/xplorerr)](https://cran.r-project.org/package=xplorerr)
-[![lifecycle](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://www.tidyverse.org/lifecycle/#maturing)
+[![cran checks](https://cranchecks.info/badges/summary/xplorerr)](https://cran.r-project.org/web/checks/check_results_xplorerr.html) 
+[![Travis-CI Build Status](https://travis-ci.org/rsquaredacademy/xplorerr.svg?branch=master)](https://travis-ci.org/rsquaredacademy/xplorerr) [![AppVeyor Build Status](https://ci.appveyor.com/api/projects/status/github/rsquaredacademy/xplorerr?branch=master&svg=true)](https://ci.appveyor.com/project/rsquaredacademy/xplorerr) [![](https://cranlogs.r-pkg.org/badges/grand-total/xplorerr)](https://cran.r-project.org/package=xplorerr) [![lifecycle](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://www.tidyverse.org/lifecycle/#maturing)
 
 ## Overview
 

diff --git a/cran-comments.md b/cran-comments.md
@@ -1,15 +1,9 @@
 ## Test environments
-* local Windows 10, R 3.5.1
-* ubuntu 14.04 (on travis-ci), R 3.4.4, R 3.5.1, R devel
+* local Windows 10, R 3.5.2
+* ubuntu 14.04 (on travis-ci), R 3.4.4, R 3.5.2, R devel
 * win-builder (devel and release)
 
 ## R CMD check results
 
-0 errors | 0 warnings | 1 note
-
-* This is a new release.
-
-## Reverse dependencies
-
-This is a new release, so there are no reverse dependencies.
+0 errors | 0 warnings | 0 note
 
diff --git a/docs/CNAME b/docs/CNAME
@@ -0,0 +1 @@
+xplorerr.rsquaredacademy.com
diff --git a/docs/CONDUCT.html b/docs/CONDUCT.html
diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html
diff --git a/docs/LICENSE.html b/docs/LICENSE.html
diff --git a/docs/authors.html b/docs/authors.html
diff --git a/docs/docsearch.css b/docs/docsearch.css
@@ -111,23 +111,26 @@
 }
 
 .algolia-autocomplete .algolia-docsearch-footer {
-  float: none;
-  width: auto;
-  height: auto;
-  padding: .75rem 1rem 0;
-  font-size: .95rem;
-  line-height: 1;
-  color: #767676;
-  background-color: rgb(255, 255, 255);
-  border-top: 1px solid rgba(0, 0, 0, .1)
+  width: 110px;
+  height: 20px;
+  z-index: 3;
+  margin-top: 10.66667px;
+  float: right;
+  font-size: 0;
+  line-height: 0;
 }
 
 .algolia-autocomplete .algolia-docsearch-footer--logo {
-  display: inline;
-  overflow: visible;
-  color: inherit;
-  text-indent: 0;
-  background: 0 0
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