Release version 1.66

INSTALL_ME.txt

@@ -28,7 +28,7 @@ OBTAINING R/QTL
 INSTALLATION OF R AND R/QTL (Windows)
 
   1. The Windows version of R is distributed as a single file, with a
-     name something like R-4.2.2-win.exe.  Install R by executing
+     name something like R-4.3.2-win.exe.  Install R by executing
      this file.  We recommend installing R in "c:\R" rather than
      "c:\Program Files\R".  Why didn't Microsoft use "Programs" rather
      than "Program files"?
@@ -39,16 +39,16 @@ INSTALLATION OF R AND R/QTL (Windows)
 
      This will download the binary from CRAN and install it.
 
-     Alternatively, you can download the "qtl_1.58.zip" (or the
+     Alternatively, you can download the "qtl_1.64.zip" (or the
      equivalent).  Then start R and select (on the menu bar)
      "Packages" and then "Install package from local zip file...".
-     Find the file "qtl_1.58.zip" on your hard drive, and click
+     Find the file "qtl_1.64.zip" on your hard drive, and click
      "Open".
 
 
 INSTALLATION OF R AND R/QTL (MacOS version 10.13 and above)
 
-  1. Download the file R-4.2.2.pkg, double-click it, and follow the
+  1. Download the file R-4.3.2.pkg, double-click it, and follow the
      instructions.
 
   2. To install R/qtl, the simplest approach is to start R and type
@@ -58,7 +58,7 @@ INSTALLATION OF R AND R/QTL (MacOS version 10.13 and above)
      This will download the binary from CRAN and install it.
 
      Alternatively, download the compiled version of R/qtl for
-     Mac OS X, a file like "qtl_1.58.tgz".  Then start R and
+     Mac OS X, a file like "qtl_1.64.tgz".  Then start R and
      select (on the menu bar) "Packages & Data" -> "Package
      Installer".  Select "Local Binary Package" from the drop-down
      menu at the top of the window that comes up.  Click "Install"
@@ -78,19 +78,19 @@ INSTALLATION OF R/QTL (Unix)
      This will download the binary from CRAN and install it.
 
      Alternatively, download the R/qtl source code (a file like
-     "qtl_1.58.tar.gz").  Go into the directory containing the
+     "qtl_1.64.tar.gz").  Go into the directory containing the
      file and do one of the following:
 
      a. To install R/qtl in the standard location
         (/usr/local/lib/R/library), type
 
-            R CMD INSTALL qtl_1.58.tar.gz
+            R CMD INSTALL qtl_1.64.tar.gz
 
         You'll probably need to be superuser.
 
      b. To install the package locally, type
 
-            R CMD INSTALL --library=/home/auser/Rlibs qtl_1.58.tar.gz
+            R CMD INSTALL --library=/home/auser/Rlibs qtl_1.64.tar.gz
 
         (where "/home/auser/Rlibs" should be replaced with the
         appropriate directory).

download/index.html

@@ -45,7 +45,7 @@ <h2 align="center">R/qtl download</h2>
 <table noborder cellspacing=3 cellpadding=3>
 <tr><td colspan=3><font color="#23238e">Current version</font>
   <tr><td width=100>&nbsp;<td>Unix source:<td><a
-      href="qtl_1.62.tar.gz">qtl_1.62.tar.gz</a><td valign="top">(2023-11-17)
+      href="qtl_1.66.tar.gz">qtl_1.66.tar.gz</a><td valign="top">(2023-11-27)
 
 <tr><td>&nbsp;
 <tr><td valign="top" colspan=4><font
@@ -61,7 +61,8 @@ <h2 align="center">R/qtl download</h2>
 
 <tr><td>&nbsp;
 <tr><td colspan=2><font color="#23238e">Previous versions</font>
-            <td><a href="old/qtl_1.60.tar.gz">qtl_1.60.tar.gz</a>        <td valign="top">(2023-04-18)
+            <td><a href="old/qtl_1.62.tar.gz">qtl_1.62.tar.gz</a>        <td valign="top">(2023-11-17)
+<tr><td><td><td><a href="old/qtl_1.60.tar.gz">qtl_1.60.tar.gz</a>        <td valign="top">(2023-04-18)
 <tr><td><td><td><a href="old/qtl_1.58.tar.gz">qtl_1.58.tar.gz</a>        <td valign="top">(2022-12-22)
 <tr><td><td><td><a href="old/qtl_1.54.tar.gz">qtl_1.54.tar.gz</a>        <td valign="top">(2022-12-01)
 <tr><td><td><td><a href="old/qtl_1.52.tar.gz">qtl_1.52.tar.gz</a>        <td valign="top">(2022-07-09)

index.html

@@ -19,7 +19,7 @@ <h2 align="center">R/qtl: A QTL mapping environment</h2>
 <h3 align="center">Software for mapping quantitative trait loci in
 experimental crosses</h3>
 
-<p align="center"> Current version: 1.62 (2023-11-17)  <br>
+<p align="center"> Current version: 1.66 (2023-11-27)  <br>
 
 <p align="center">[ <a
 href="download">Download</a> | <a