Collapse 3D y before calculating initial model guess for gaussian mod… #1107
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - 'v*' | |
| tags: | |
| - 'v*' | |
| pull_request: | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| permissions: | |
| contents: read | |
| jobs: | |
| # Github Actions supports ubuntu, windows, and macos virtual environments: | |
| # https://help.github.com/en/actions/reference/virtual-environments-for-github-hosted-runners | |
| ci_tests: | |
| name: ${{ matrix.name }} | |
| runs-on: ${{ matrix.os }} | |
| continue-on-error: ${{ matrix.allow_failure }} | |
| strategy: | |
| matrix: | |
| include: | |
| - name: Code style checks | |
| os: ubuntu-latest | |
| python: 3.x | |
| toxenv: codestyle | |
| allow_failure: false | |
| - name: PEP 517 | |
| os: ubuntu-latest | |
| python: 3.x | |
| toxenv: pep517 | |
| allow_failure: false | |
| - name: Security audit | |
| os: ubuntu-latest | |
| python: 3.x | |
| toxenv: securityaudit | |
| allow_failure: false | |
| - name: Python 3.11 with coverage checking, all deps, and remote data | |
| os: ubuntu-latest | |
| python: '3.11' | |
| toxenv: py311-test-alldeps-cov | |
| toxposargs: --remote-data --run-slow | |
| allow_failure: false | |
| - name: OS X - Python 3.12 | |
| os: macos-latest | |
| python: '3.12' | |
| toxenv: py312-test | |
| allow_failure: false | |
| - name: Windows - Python 3.10 | |
| os: windows-latest | |
| python: '3.10' | |
| toxenv: py310-test | |
| allow_failure: false | |
| # This also runs on cron but we want to make sure new changes | |
| # won't break this job at the PR stage. | |
| - name: Python 3.12 with latest dev versions of key dependencies, and remote data | |
| os: ubuntu-latest | |
| python: '3.12' | |
| toxenv: py312-test-devdeps | |
| toxposargs: --remote-data --run-slow | |
| allow_failure: true | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683 # v4.2.2 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up python ${{ matrix.python }} on ${{ matrix.os }} | |
| uses: actions/setup-python@0b93645e9fea7318ecaed2b359559ac225c90a2b # v5.3.0 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Install base dependencies | |
| run: python -m pip install --upgrade pip tox | |
| - name: Test/run with tox | |
| run: tox -e ${{ matrix.toxenv }} -- ${{ matrix.toxposargs }} | |
| - name: Upload coverage to artifacts | |
| if: "contains(matrix.toxenv, '-cov')" | |
| uses: actions/upload-artifact@b4b15b8c7c6ac21ea08fcf65892d2ee8f75cf882 # v4.4.3 | |
| with: | |
| name: coverage_${{ matrix.toxenv }}.xml | |
| path: coverage.xml | |
| if-no-files-found: error | |
| upload-codecov: | |
| needs: [ ci_tests ] | |
| permissions: | |
| contents: none | |
| runs-on: ubuntu-latest | |
| name: Upload Coverage | |
| steps: | |
| - name: Download coverage artifacts | |
| uses: actions/download-artifact@fa0a91b85d4f404e444e00e005971372dc801d16 # v4.1.8 | |
| with: | |
| path: coverage | |
| pattern: coverage_* | |
| merge-multiple: true | |
| - name: Upload report to Codecov | |
| if: ${{ hashFiles('coverage/') != '' }} | |
| uses: codecov/codecov-action@b9fd7d16f6d7d1b5d2bec1a2887e65ceed900238 # v4.6.0 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| directory: coverage | |
| fail_ci_if_error: true | |
| verbose: true |