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ci: update workflow files #13
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@@ -14,3 +14,4 @@ prefix_notes.R | |
| .github | ||
| ^codemeta\.json$ | ||
| inst/scripts/* | ||
| ^\.github$ | ||
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| @@ -0,0 +1 @@ | ||
| *.html |
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| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| push: | ||
| branches: [main, master] | ||
| pull_request: | ||
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| name: R-CMD-check.yaml | ||
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| permissions: read-all | ||
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| jobs: | ||
| R-CMD-check: | ||
| runs-on: ${{ matrix.config.os }} | ||
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| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
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| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| config: | ||
| - {os: macos-latest, r: 'release'} | ||
| - {os: windows-latest, r: 'release'} | ||
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | ||
| - {os: ubuntu-latest, r: 'release'} | ||
| - {os: ubuntu-latest, r: 'oldrel-1'} | ||
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| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| R_KEEP_PKG_SOURCE: yes | ||
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| steps: | ||
| - uses: actions/checkout@v4 | ||
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| - uses: r-lib/actions/setup-pandoc@v2 | ||
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| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| r-version: ${{ matrix.config.r }} | ||
| http-user-agent: ${{ matrix.config.http-user-agent }} | ||
| use-public-rspm: true | ||
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| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::rcmdcheck | ||
| needs: check | ||
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| - uses: r-lib/actions/check-r-package@v2 | ||
| with: | ||
| upload-snapshots: true | ||
| build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")' |
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| Original file line number | Diff line number | Diff line change |
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| @@ -1,86 +1,53 @@ | ||
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| workflow_dispatch: | ||
| schedule: | ||
| - cron: '* * * * 1,3,5' # every Mon/Wed/Fri | ||
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| name: real-requests | ||
| name: R-CMD-check.yaml | ||
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| permissions: read-all | ||
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| jobs: | ||
| real-requests: | ||
| runs-on: ubuntu-16.04 | ||
| name: 'ubuntu-16.04 (R-release)' | ||
| R-CMD-check: | ||
| runs-on: ${{ matrix.config.os }} | ||
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|
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| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
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| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| config: | ||
| - {os: macos-latest, r: 'release'} | ||
| - {os: windows-latest, r: 'release'} | ||
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | ||
| - {os: ubuntu-latest, r: 'release'} | ||
| - {os: ubuntu-latest, r: 'oldrel-1'} | ||
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| env: | ||
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | ||
| CRAN: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest" | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| R_KEEP_PKG_SOURCE: yes | ||
| VCR_VERBOSE_ERRORS: true | ||
| VCR_TURN_OFF: true | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
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| - uses: r-lib/actions/setup-r@v1 | ||
| with: | ||
| r-version: 'release' | ||
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| - uses: r-lib/actions/setup-pandoc@v1 | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
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| - name: Query dependencies | ||
| run: | | ||
| install.packages('remotes') | ||
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | ||
| writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | ||
| shell: Rscript {0} | ||
| - uses: r-lib/actions/setup-pandoc@v2 | ||
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| - name: Cache R packages | ||
| uses: actions/cache@v2 | ||
| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| path: ${{ env.R_LIBS_USER }} | ||
| key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | ||
| restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | ||
|
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| - name: Install pak | ||
| run: | | ||
| install.packages("pak", repos = "https://r-lib.github.io/p/pak/dev/") | ||
| shell: Rscript {0} | ||
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| - name: Install system dependencies | ||
| if: runner.os == 'Linux' | ||
| env: | ||
| RHUB_PLATFORM: linux-x86_64-ubuntu-gcc | ||
| run: | | ||
| while read -r cmd | ||
| do | ||
| eval sudo $cmd | ||
| done < <(Rscript -e 'writeLines(pak::local_system_requirements("ubuntu", "16.04"))') | ||
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| - name: Install dependencies | ||
| run: | | ||
| pak::local_install_dev_deps() | ||
| pak::pkg_install("rcmdcheck") | ||
| shell: Rscript {0} | ||
| r-version: ${{ matrix.config.r }} | ||
| http-user-agent: ${{ matrix.config.http-user-agent }} | ||
| use-public-rspm: true | ||
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| - name: Session info | ||
| run: | | ||
| options(width = 100) | ||
| pkgs <- installed.packages()[, "Package"] | ||
| sessioninfo::session_info(pkgs, include_base = TRUE) | ||
| shell: Rscript {0} | ||
|
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| - name: Check | ||
| timeout-minutes: 10 | ||
| env: | ||
| _R_CHECK_CRAN_INCOMING_: false | ||
| run: rcmdcheck::rcmdcheck(args = c("--no-build-vignettes", "--no-manual", "--as-cran"), error_on = "warning", check_dir = "check") | ||
| shell: Rscript {0} | ||
|
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| - name: Show testthat output | ||
| if: always() | ||
| run: find check -name 'test-all.Rout*' -exec cat '{}' \; || true | ||
| shell: bash | ||
| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::rcmdcheck | ||
| needs: check | ||
|
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| - name: Upload check results | ||
| if: failure() | ||
| uses: actions/upload-artifact@v4 | ||
| - uses: r-lib/actions/check-r-package@v2 | ||
| with: | ||
| name: ubuntu-16.04-r-release-results | ||
| path: check | ||
| upload-snapshots: true | ||
| build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")' | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,61 @@ | ||
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | ||
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | ||
| on: | ||
| push: | ||
| branches: [main, master] | ||
| pull_request: | ||
|
|
||
| name: test-coverage.yaml | ||
|
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||
| permissions: read-all | ||
|
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||
| jobs: | ||
| test-coverage: | ||
| runs-on: ubuntu-latest | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
|
|
||
| steps: | ||
| - uses: actions/checkout@v4 | ||
|
|
||
| - uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| use-public-rspm: true | ||
|
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| - uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: any::covr, any::xml2 | ||
| needs: coverage | ||
|
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| - name: Test coverage | ||
| run: | | ||
| cov <- covr::package_coverage( | ||
| quiet = FALSE, | ||
| clean = FALSE, | ||
| install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package") | ||
| ) | ||
| covr::to_cobertura(cov) | ||
| shell: Rscript {0} | ||
|
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| - uses: codecov/codecov-action@v4 | ||
| with: | ||
| # Fail if error if not on PR, or if on PR and token is given | ||
| fail_ci_if_error: ${{ github.event_name != 'pull_request' || secrets.CODECOV_TOKEN }} | ||
| file: ./cobertura.xml | ||
| plugin: noop | ||
| disable_search: true | ||
| token: ${{ secrets.CODECOV_TOKEN }} | ||
|
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| - name: Show testthat output | ||
| if: always() | ||
| run: | | ||
| ## -------------------------------------------------------------------- | ||
| find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true | ||
| shell: bash | ||
|
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| - name: Upload test results | ||
| if: failure() | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: coverage-test-failures | ||
| path: ${{ runner.temp }}/package |
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For this one I took R-CMD-check.yml with three edits