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Update egapx #42

Merged
merged 14 commits into from
Nov 16, 2024
Merged

Update egapx #42

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e18f7d0
output gff is now a separate histroy item
Oct 11, 2024
2f8ec0e
changed tests back to expect failure
Oct 11, 2024
f7a8a0c
bumping version number
Oct 11, 2024
2c87063
making form interface the default, adding proteins
Oct 14, 2024
3206869
making form interface the default, adding proteins, minor reformatting
Oct 14, 2024
b2c63f1
bumping version
Oct 14, 2024
0162ba3
Merge branch 'main' into update-egapx
richard-burhans Oct 14, 2024
e4bf7ac
update
Nov 15, 2024
0dfb5f1
Merge branch 'main' into update-egapx
richard-burhans Nov 15, 2024
ac0cd3e
Update tools/ncbi_egapx/macros.xml
richard-burhans Nov 15, 2024
fcb701a
Update tools/ncbi_egapx/macros.xml
richard-burhans Nov 16, 2024
f555eb9
Update tools/ncbi_egapx/macros.xml
richard-burhans Nov 16, 2024
daeff42
Update tools/ncbi_egapx/ncbi_egapx.xml
richard-burhans Nov 16, 2024
ba23c5a
Merge branch 'main' into update-egapx
richard-burhans Nov 16, 2024
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4 changes: 2 additions & 2 deletions tools/ncbi_egapx/macros.xml
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Original file line number Diff line number Diff line change
Expand Up @@ -4,8 +4,8 @@
<container type="docker">quay.io/galaxy/egapx:@TOOL_VERSION@</container>
</requirements>
</xml>
<token name="@TOOL_VERSION@">0.3.0-alpha</token>
<token name="@VERSION_SUFFIX@">1</token>
<token name="@TOOL_VERSION@">0.2-alpha</token>
<token name="@VERSION_SUFFIX@">2</token>
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<token name="@PROFILE@">22.05</token>
<xml name="edam_ontology">
<edam_operations>
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1 change: 1 addition & 0 deletions tools/ncbi_egapx/ncbi_egapx.xml
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Expand Up @@ -82,6 +82,7 @@ $row
</when>
</conditional>
<param name="taxid" type="integer" min="0" value="0" label="NCBI Taxon ID" help="Used to identify the HMM model files needed"/>

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<conditional name="condrnaseq">
<param name="rna_type_select" type="select" label="RNA sequence data source"
help="Select RNAseq input data from history or input a list of SRA identifiers or remote URI">
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