fix: properly transfer data from tempfile

rhysnewell · Jan 11, 2024 · d9f8f7d · d9f8f7d
1 parent c857eb6
commit d9f8f7d
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/aviary/scripts/singlem_reads.py b/aviary/scripts/singlem_reads.py
@@ -177,8 +177,8 @@ def _check_processes(self, max_processes: int, logf):
         while len(self.process_queue) > max_processes:
             for i, (p, f) in enumerate(self.process_queue):
                 if p.poll() is not None:
-                    f.seek(0)
-                    logf.write(f.read())
+                    for line in f:
+                        logf.write(line)
                     f.close()
                     self.process_queue.pop(i)
                     break