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Merge pull request #224 from rhysnewell/increase-vamb-time
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Increase base vamb runtime to 48h
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AroneyS authored Nov 7, 2024
2 parents eb474cb + 1aceac0 commit 4c86082
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion aviary/modules/binning/binning.smk
Original file line number Diff line number Diff line change
Expand Up @@ -178,7 +178,7 @@ rule vamb:
config["max_threads"]
resources:
mem_mb = lambda wildcards, attempt: min(int(config["max_memory"])*1024, 128*1024*attempt),
runtime = lambda wildcards, attempt: 24*60*attempt,
runtime = lambda wildcards, attempt: 48*60*attempt,
gpus = 1 if config["request_gpu"] else 0
output:
"data/vamb_bins/done"
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