Update setup_container.nf

replikation · Sep 10, 2020 · 3a30170 · 3a30170
1 parent 9b2c412
commit 3a30170
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/modules/setup_container.nf b/modules/setup_container.nf
@@ -16,8 +16,10 @@ process setup_container {
         else if (workflow.profile.contains('singularity'))
         """
         if  [[ ${params.cachedir} = /* ]] ; then
+                mkdir -p ${params.cachedir} 
                 download_singularity.sh ${config_file} ${params.cachedir} 
         else
+                mkdir -p ${workflow.launchDir}/${params.cachedir} 
                 download_singularity.sh ${config_file} ${workflow.launchDir}/${params.cachedir} 
         fi