Set up repo

.Rbuildignore

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+^trendsEnsemble\.Rproj$
+^\.Rproj\.user$
+^\.github$
+^README\.Rmd$

.github/.gitignore

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+*.html

.github/workflows/R-CMD-check.yaml

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+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
+# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
+on:
+  push:
+    branches: [main, master]
+  pull_request:
+    branches: [main, master]
+
+name: R-CMD-check
+
+permissions: read-all
+
+jobs:
+  R-CMD-check:
+    runs-on: ${{ matrix.config.os }}
+
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+
+    strategy:
+      fail-fast: false
+      matrix:
+        config:
+          - {os: macos-latest,   r: 'release'}
+          - {os: windows-latest, r: 'release'}
+          - {os: ubuntu-latest,   r: 'devel', http-user-agent: 'release'}
+          - {os: ubuntu-latest,   r: 'release'}
+          - {os: ubuntu-latest,   r: 'oldrel-1'}
+
+    env:
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      R_KEEP_PKG_SOURCE: yes
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: r-lib/actions/setup-pandoc@v2
+
+      - uses: r-lib/actions/setup-r@v2
+        with:
+          r-version: ${{ matrix.config.r }}
+          http-user-agent: ${{ matrix.config.http-user-agent }}
+          use-public-rspm: true
+
+      - uses: r-lib/actions/setup-r-dependencies@v2
+        with:
+          extra-packages: any::rcmdcheck
+          needs: check
+
+      - uses: r-lib/actions/check-r-package@v2
+        with:
+          upload-snapshots: true
+          build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'

.gitignore

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+.Rproj.user
+.Rhistory
+.RData
+.Ruserdata
+*.code-workspace

DESCRIPTION

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+Package: trendsEnsemble
+Title: Functions to Create the UMass-trends_ensemble Model
+Version: 0.0.0.9000
+Authors@R: c(
+    person(given = "Evan L",
+           family = "Ray",
+           email = "[email protected]",
+           role = c("aut")),
+    person(given = "Li",
+           family = "Shandross",
+           role = c("aut", "cre"),
+           email = "[email protected]",
+           comment = c(ORCID = "0009-0008-1348-1954")),
+    person(given = "Nutcha",
+           family = "Wattanachit",
+           role = c("aut")),
+    person(given = "Aaron",
+           family = "Gerding",
+           role = c("aut")),
+    person(given = "Nicholas G.",
+           family = "Reich",
+           role = c("aut"),
+           email = "[email protected]",
+           comment = c(ORCID = "0000-0003-3503-9899")))
+Description: A collection of functions used to create the UMass-trends_ensemble,
+    an equally weighted ensemble of simple time series baseline models
+License: `use_mit_license()`, `use_gpl3_license()` or friends to pick a
+    license
+Encoding: UTF-8
+Roxygen: list(markdown = TRUE)
+RoxygenNote: 7.3.1

NAMESPACE

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+# Generated by roxygen2: do not edit by hand
+

README.Rmd

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+---
+output: github_document
+---
+
+<!-- README.md is generated from README.Rmd. Please edit that file -->
+
+```{r, include = FALSE}
+knitr::opts_chunk$set(
+  collapse = TRUE,
+  comment = "#>",
+  fig.path = "man/figures/README-",
+  out.width = "100%"
+)
+```
+
+# trendsEnsemble
+
+<!-- badges: start -->
+[![R-CMD-check](https://github.com/reichlab/trendsEnsemble/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/reichlab/trendsEnsemble/actions/workflows/R-CMD-check.yaml)
+<!-- badges: end -->
+
+The goal of trendsEnsemble is to ...
+
+## Installation
+
+You can install the development version of trendsEnsemble from [GitHub](https://github.com/) with:
+
+``` r
+# install.packages("devtools")
+devtools::install_github("reichlab/trendsEnsemble")
+```
+
+## Example
+
+This is a basic example which shows you how to solve a common problem:
+
+```{r example, eval = FALSE}
+library(trendsEnsemble)
+## basic example code
+```
+
+What is special about using `README.Rmd` instead of just `README.md`? You can include R chunks like so:
+
+```{r cars}
+summary(cars)
+```
+
+You'll still need to render `README.Rmd` regularly, to keep `README.md` up-to-date. `devtools::build_readme()` is handy for this.
+
+You can also embed plots, for example:
+
+```{r pressure, echo = FALSE}
+plot(pressure)
+```
+
+In that case, don't forget to commit and push the resulting figure files, so they display on GitHub and CRAN.

README.md

@@ -1 +1,54 @@
-# trends-ensemble
+
+<!-- README.md is generated from README.Rmd. Please edit that file -->
+
+# trendsEnsemble
+
+<!-- badges: start -->
+
+[![R-CMD-check](https://github.com/reichlab/trendsEnsemble/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/reichlab/trendsEnsemble/actions/workflows/R-CMD-check.yaml)
+<!-- badges: end -->
+
+The goal of trendsEnsemble is to …
+
+## Installation
+
+You can install the development version of trendsEnsemble from
+[GitHub](https://github.com/) with:
+
+``` r
+# install.packages("devtools")
+devtools::install_github("reichlab/trendsEnsemble")
+```
+
+## Example
+
+This is a basic example which shows you how to solve a common problem:
+
+``` r
+library(trendsEnsemble)
+## basic example code
+```
+
+What is special about using `README.Rmd` instead of just `README.md`?
+You can include R chunks like so:
+
+``` r
+summary(cars)
+#>      speed           dist       
+#>  Min.   : 4.0   Min.   :  2.00  
+#>  1st Qu.:12.0   1st Qu.: 26.00  
+#>  Median :15.0   Median : 36.00  
+#>  Mean   :15.4   Mean   : 42.98  
+#>  3rd Qu.:19.0   3rd Qu.: 56.00  
+#>  Max.   :25.0   Max.   :120.00
+```
+
+You’ll still need to render `README.Rmd` regularly, to keep `README.md`
+up-to-date. `devtools::build_readme()` is handy for this.
+
+You can also embed plots, for example:
+
+<img src="man/figures/README-pressure-1.png" width="100%" />
+
+In that case, don’t forget to commit and push the resulting figure
+files, so they display on GitHub and CRAN.

trendsEnsemble.Rproj

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+Version: 1.0
+
+RestoreWorkspace: No
+SaveWorkspace: No
+AlwaysSaveHistory: Default
+
+EnableCodeIndexing: Yes
+UseSpacesForTab: Yes
+NumSpacesForTab: 2
+Encoding: UTF-8
+
+RnwWeave: knitr
+LaTeX: pdfLaTeX
+
+AutoAppendNewline: Yes
+StripTrailingWhitespace: Yes
+LineEndingConversion: Posix
+
+BuildType: Package
+PackageUseDevtools: Yes
+PackageInstallArgs: --no-multiarch --with-keep.source
+PackageRoxygenize: rd,collate,namespace