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Integrate renumbering and compression to cugraph-dgl to accelerate MFG creation #3887

Merged
merged 108 commits into from
Oct 3, 2023
Merged

Integrate renumbering and compression to cugraph-dgl to accelerate MFG creation #3887

merged 108 commits into from
Oct 3, 2023

Commits on Aug 22, 2023

  1. move sampling relatd functions in graph_functions.hpp to sampling_fun… 

    …ctions.hpp
    @seunghwak
    seunghwak committed Aug 22, 2023
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  2. draft sampling post processing function APIs

    @seunghwak
    seunghwak committed Aug 22, 2023
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Commits on Aug 24, 2023

  1. API updates

    @seunghwak
    seunghwak committed Aug 24, 2023
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Commits on Aug 25, 2023

  1. API updates

    @seunghwak
    seunghwak committed Aug 25, 2023
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  2. deprecate the existing renumber_sampeld_edgelist function

    @seunghwak
    seunghwak committed Aug 25, 2023
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  3. combine renumber & compression/sorting functions

    @seunghwak
    seunghwak committed Aug 25, 2023
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  4. minor documentation updates

    @seunghwak
    seunghwak committed Aug 25, 2023
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  5. mionr documentation updates

    @seunghwak
    seunghwak committed Aug 25, 2023
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Commits on Aug 27, 2023

  1. deprecate the existing sampling output renumber function

    @seunghwak
    seunghwak committed Aug 27, 2023
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Commits on Aug 31, 2023

  1. initial implementation of sampling post processing

    @seunghwak
    seunghwak committed Aug 31, 2023
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  2. cuda::std::atomic=>cuda::atomic

    @seunghwak
    seunghwak committed Aug 31, 2023
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  3. update API documentation

    @seunghwak
    seunghwak committed Aug 31, 2023
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  4. add additional input testing

    @seunghwak
    seunghwak committed Aug 31, 2023
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  5. replace testing for sampling output post processing

    @seunghwak
    seunghwak committed Aug 31, 2023
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  6. cosmetic updates

    @seunghwak
    seunghwak committed Aug 31, 2023
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  7. bug fixes

    @seunghwak
    seunghwak committed Aug 31, 2023
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Commits on Sep 1, 2023

  1. Merge branch 'fea_mfg' of https://github.com/seunghwak/cugraph into c… 

    …ugraph-sample-convert
    @alexbarghi-nv
    alexbarghi-nv committed Sep 1, 2023
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  2. the c api

    @alexbarghi-nv
    alexbarghi-nv committed Sep 1, 2023
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  3. fix compile errors

    @alexbarghi-nv
    alexbarghi-nv committed Sep 1, 2023
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  4. reformat

    @alexbarghi-nv
    alexbarghi-nv committed Sep 1, 2023
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Commits on Sep 5, 2023

  1. rename test file from .cu to .cpp

    @seunghwak
    seunghwak committed Sep 5, 2023
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Commits on Sep 6, 2023

  1. bug fixes

    @seunghwak
    seunghwak committed Sep 6, 2023
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  2. add fill wrapper

    @seunghwak
    seunghwak committed Sep 6, 2023
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  3. undo adding fill wrapper

    @seunghwak
    seunghwak committed Sep 6, 2023
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  4. sampling test from .cpp to .cu

    @seunghwak
    seunghwak committed Sep 6, 2023
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Commits on Sep 7, 2023

  1. fix a typo

    @seunghwak
    seunghwak committed Sep 7, 2023
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  2. Merge branch 'branch-23.10' of github.com:rapidsai/cugraph into fea_mfg

    @seunghwak
    seunghwak committed Sep 7, 2023
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  3. do not return valid nzd vertices if doubly_compress is false

    @seunghwak
    seunghwak committed Sep 7, 2023
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Commits on Sep 8, 2023

  1. bug fix

    @seunghwak
    seunghwak committed Sep 8, 2023
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  2. test code

    @seunghwak
    seunghwak committed Sep 8, 2023
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  3. Merge branch 'branch-23.10' of github.com:rapidsai/cugraph into fea_mfg

    @seunghwak
    seunghwak committed Sep 8, 2023
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  4. Merge branch 'branch-23.10' into cugraph-sample-convert

    @alexbarghi-nv
    alexbarghi-nv committed Sep 8, 2023
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  5. Merge branch 'fea_mfg' of https://github.com/seunghwak/cugraph into c… 

    …ugraph-sample-convert
    @alexbarghi-nv
    alexbarghi-nv committed Sep 8, 2023
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  6. bug fix

    @seunghwak
    seunghwak committed Sep 8, 2023
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  7. update documentation

    @seunghwak
    seunghwak committed Sep 8, 2023
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Commits on Sep 11, 2023

  1. fix c api issues

    @alexbarghi-nv
    alexbarghi-nv committed Sep 11, 2023
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  2. Merge branch 'branch-23.10' of https://github.com/rapidsai/cugraph in… 

    …to cugraph-sample-convert
    @alexbarghi-nv
    alexbarghi-nv committed Sep 11, 2023
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  3. C API fixes, Python/PLC API work

    @alexbarghi-nv
    alexbarghi-nv committed Sep 11, 2023
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  4. adjust hop offsets when there is a jump in major vertex IDs between hops

    @seunghwak
    seunghwak committed Sep 11, 2023
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Commits on Sep 12, 2023

  1. add sort only function

    @seunghwak
    seunghwak committed Sep 12, 2023
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  2. Merge branch 'branch-23.10' of github.com:rapidsai/cugraph into fea_mfg

    @seunghwak
    seunghwak committed Sep 12, 2023
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  3. various improvements

    @alexbarghi-nv
    alexbarghi-nv committed Sep 12, 2023
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  4. Merge branch 'fea_mfg' of https://github.com/seunghwak/cugraph into c… 

    …ugraph-sample-convert
    @alexbarghi-nv
    alexbarghi-nv committed Sep 12, 2023
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Commits on Sep 19, 2023

  1. fix merge conflict

    @alexbarghi-nv
    alexbarghi-nv committed Sep 19, 2023
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  2. fix bad merge

    @alexbarghi-nv
    alexbarghi-nv committed Sep 19, 2023
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  3. asdf

    @alexbarghi-nv
    alexbarghi-nv committed Sep 19, 2023
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  4. clarifying comments

    @alexbarghi-nv
    alexbarghi-nv committed Sep 19, 2023
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  5. t

    @alexbarghi-nv
    alexbarghi-nv committed Sep 19, 2023
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  6. latest code

    @alexbarghi-nv
    alexbarghi-nv committed Sep 19, 2023
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  7. bug fix

    @seunghwak
    seunghwak committed Sep 19, 2023
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  8. Merge branch 'branch-23.10' of github.com:rapidsai/cugraph into bug_o… 

    …ffsets
    @seunghwak
    seunghwak committed Sep 19, 2023
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  9. additional bug fix

    @seunghwak
    seunghwak committed Sep 19, 2023
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  10. add additional checking to detect the previously neglected bugs

    @seunghwak
    seunghwak committed Sep 19, 2023
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  11. Merge branch 'bug_offsets' of https://github.com/seunghwak/cugraph in… 

    …to cugraph-sample-convert
    @alexbarghi-nv
    alexbarghi-nv committed Sep 19, 2023
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Commits on Sep 20, 2023

  1. wrap up sg API

    @alexbarghi-nv
    alexbarghi-nv committed Sep 20, 2023
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  2. test fix, cleanup

    @alexbarghi-nv
    alexbarghi-nv committed Sep 20, 2023
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  3. refactor code into new shared utility

    @alexbarghi-nv
    alexbarghi-nv committed Sep 20, 2023
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  4. get mg api working

    @alexbarghi-nv
    alexbarghi-nv committed Sep 20, 2023
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  5. add offset mg test

    @alexbarghi-nv
    alexbarghi-nv committed Sep 20, 2023
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  6. fix typos

    @tingyu66
    tingyu66 committed Sep 20, 2023
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  7. fix renumber map issue in C++

    @alexbarghi-nv
    alexbarghi-nv committed Sep 20, 2023
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  8. empty commit to test signing

    @tingyu66
    tingyu66 committed Sep 20, 2023
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  9. verify new compression formats for sg

    @alexbarghi-nv
    alexbarghi-nv committed Sep 20, 2023
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  10. complete csr/csc tests for both sg/mg

    @alexbarghi-nv
    alexbarghi-nv committed Sep 20, 2023
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  11. get the bulk sampler working again

    @alexbarghi-nv
    alexbarghi-nv committed Sep 20, 2023
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  12. remove unwanted file

    @alexbarghi-nv
    alexbarghi-nv committed Sep 20, 2023
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Commits on Sep 21, 2023

  1. fix wrong dataframe issue

    @alexbarghi-nv
    alexbarghi-nv committed Sep 21, 2023
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  2. update sg bulk sampler tests

    @alexbarghi-nv
    alexbarghi-nv committed Sep 21, 2023
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  3. fix mg bulk sampler tests

    @alexbarghi-nv
    alexbarghi-nv committed Sep 21, 2023
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  4. write draft of csr bulk sampler

    @alexbarghi-nv
    alexbarghi-nv committed Sep 21, 2023
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Commits on Sep 22, 2023

  1. overhaul the writer methods

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  2. remove unused method

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  3. style

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  4. Merge branch 'branch-23.10' of https://github.com/rapidsai/cugraph in… 

    …to cugraph-sample-convert
    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  5. remove notebook

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  6. add clarifying comment to c++

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  7. add future warnings

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  8. cleanup

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  9. remove print statements

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  10. fix c api bug

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  11. revert dataloader change

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  12. fix empty df bug

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  13. style

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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  14. io

    @alexbarghi-nv
    alexbarghi-nv committed Sep 22, 2023
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Commits on Sep 23, 2023

  1. fix test failures, remove c++ compression enum

    @alexbarghi-nv
    alexbarghi-nv committed Sep 23, 2023
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  2. remove removed api from mg tests

    @alexbarghi-nv
    alexbarghi-nv committed Sep 23, 2023
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Commits on Sep 24, 2023

  1. formats

    @tingyu66
    tingyu66 committed Sep 24, 2023
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Commits on Sep 25, 2023

  1. Merge branch 'cugraph-sample-convert' into dgl-mfg-integration

    @tingyu66
    tingyu66 committed Sep 25, 2023
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  2. fix wrong index + off by 1 error, add check in test

    @alexbarghi-nv
    alexbarghi-nv committed Sep 25, 2023
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  3. Merge branch 'branch-23.10' into cugraph-sample-convert

    @alexbarghi-nv
    alexbarghi-nv authored Sep 25, 2023
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  4. add annotations 

    Co-authored-by: Tingyu Wang <[email protected]>
    @alexbarghi-nv @tingyu66
    alexbarghi-nv and tingyu66 authored Sep 25, 2023
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  5. docstring correction 

    Co-authored-by: Tingyu Wang <[email protected]>
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    alexbarghi-nv and tingyu66 authored Sep 25, 2023
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  6. remove empty batch check

    @alexbarghi-nv
    alexbarghi-nv committed Sep 25, 2023
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  7. Merge branch 'cugraph-sample-convert' into dgl-mfg-integration

    @tingyu66
    tingyu66 committed Sep 25, 2023
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  8. fix capi sg test

    @alexbarghi-nv
    alexbarghi-nv committed Sep 25, 2023
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  9. disable broken tests, they are too expensive to fix and redundant

    @alexbarghi-nv
    alexbarghi-nv committed Sep 25, 2023
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  10. Merge branch 'cugraph-sample-convert' of https://github.com/alexbargh… 

    …i-nv/cugraph into cugraph-sample-convert
    @alexbarghi-nv
    alexbarghi-nv committed Sep 25, 2023
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  11. Merge branch 'cugraph-sample-convert' into dgl-mfg-integration

    @tingyu66
    tingyu66 committed Sep 25, 2023
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Commits on Sep 26, 2023

  1. process raw csc df output

    @tingyu66
    tingyu66 committed Sep 26, 2023
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  2. cast to tensors, create list for minibatches

    @tingyu66
    tingyu66 committed Sep 26, 2023
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Commits on Sep 27, 2023

  1. infer n_hops, n_batches from df

    @tingyu66
    tingyu66 committed Sep 27, 2023
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  2. enable csc loader

    @tingyu66
    tingyu66 committed Sep 27, 2023
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Commits on Sep 28, 2023

  1. docstring

    @tingyu66
    tingyu66 committed Sep 28, 2023
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  2. Merge branch 'branch-23.10' into dgl-mfg-integration

    @tingyu66
    tingyu66 authored Sep 28, 2023
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  3. add test using karate dataset

    @tingyu66
    tingyu66 committed Sep 28, 2023
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Commits on Oct 2, 2023

  1. improve slicing

    @tingyu66
    tingyu66 committed Oct 2, 2023
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  2. Merge branch 'branch-23.10' into dgl-mfg-integration

    @tingyu66
    tingyu66 authored Oct 2, 2023
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  3. update seeds_per_call default value

    @tingyu66
    tingyu66 committed Oct 2, 2023
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