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[FEA] Remove FAISS dependency, inherit other common dependencies from raft #1863

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Jan 23, 2022
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d9f5ec6
add option to build faiss shared libs
trxcllnt Sep 30, 2021
efe559d
update cuco and point to my raft fork
trxcllnt Sep 30, 2021
332fed7
create a faiss-exports export-set
trxcllnt Sep 30, 2021
8e509de
mark faiss to be found as part of resolving cugraph-exports dependencies
trxcllnt Sep 30, 2021
d0077e0
create faiss-exports export set
trxcllnt Sep 30, 2021
b32f1cc
create faiss-exports export set
trxcllnt Sep 30, 2021
9ea0f75
compile both compute and sm if building for a single GPU arch
trxcllnt Oct 1, 2021
e7e4160
Merge branch 'fix/build-shared-faiss' into fix/node-rapids-21.10
trxcllnt Oct 1, 2021
ce9d0df
remove faiss from cugraph dependencies
trxcllnt Oct 5, 2021
a9f3630
remove CUGRAPH_USE_FAISS_STATIC and BLAS_LIBRARIES
trxcllnt Oct 5, 2021
4155315
use fix/node-rapids-21.10 branch
trxcllnt Oct 5, 2021
896df79
Merge branch 'branch-21.10' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Oct 5, 2021
de281b4
use rapidsai/raft again
trxcllnt Oct 5, 2021
4d579f8
use CUGRAPH_BRANCH_VERSION_raft
trxcllnt Oct 5, 2021
b3c7e61
fix FORK
trxcllnt Oct 5, 2021
5d0c4db
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Oct 5, 2021
fa1e96c
update rapids-cmake version
trxcllnt Oct 6, 2021
92d794c
remove redundant dependencies that raft provides, remove dead code
trxcllnt Oct 7, 2021
7e635ff
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Oct 7, 2021
91d217f
no faiss
trxcllnt Oct 7, 2021
583024c
switch to my fork to test in CI
trxcllnt Oct 14, 2021
6eeead5
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Oct 14, 2021
fb155ab
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Oct 14, 2021
1d71d15
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Oct 18, 2021
efa2d26
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Oct 20, 2021
0ceb8d0
remove dead code
trxcllnt Oct 27, 2021
c3c7422
add workaround to fix path in CI
trxcllnt Oct 27, 2021
13022c1
print PATH and ld paths in build.sh
trxcllnt Oct 27, 2021
0e47956
don't add include dirs that we get from linked targets
trxcllnt Oct 27, 2021
dbc90e7
print all the custom gcc9 executables in CI
trxcllnt Oct 27, 2021
b012c62
print the contents of /usr/local/gcc9 in CI
trxcllnt Oct 27, 2021
23c146f
add custom binutils to path
trxcllnt Oct 29, 2021
68afa4d
print ld paths
trxcllnt Oct 29, 2021
242c7bb
force CXX11 ABI
trxcllnt Nov 2, 2021
639fd12
print env
trxcllnt Nov 2, 2021
64721b2
remove build.sh PATH workaround
trxcllnt Nov 4, 2021
822c747
link gtest and gmock to C tests
trxcllnt Nov 4, 2021
9d5c700
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Nov 4, 2021
f62fb52
updating cuh to hpp for rng
divyegala Nov 9, 2021
15e89b9
updating raft tag
divyegala Nov 9, 2021
15010b6
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Nov 10, 2021
aa68e0d
remove dead code
trxcllnt Nov 10, 2021
6e85d8f
add comment indicating which dependencies we're getting from RAFT
trxcllnt Nov 10, 2021
e0d20f4
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Nov 11, 2021
028b893
Revert RAFT pin back to main
divyegala Nov 11, 2021
90281a6
Removing unnecessary include
divyegala Nov 11, 2021
02e755c
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Nov 11, 2021
e204658
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Nov 11, 2021
2f93d49
Merge remote-tracking branch 'upstream/branch-21.12' into imp-21.12-r…
divyegala Nov 12, 2021
04f6728
Merge branch 'imp-21.12-rng_detail' of github.com:divyegala/cugraph i…
trxcllnt Nov 12, 2021
bad10fa
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Nov 12, 2021
f5710c3
remove dead code
trxcllnt Nov 12, 2021
0d7c110
remove unused variable
trxcllnt Nov 12, 2021
940c0e3
Merge branch 'branch-21.12' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Nov 16, 2021
9729a3d
remove faiss patchelf
trxcllnt Nov 16, 2021
ac8fcfa
remove faiss from conda dev envs and recipe
trxcllnt Nov 16, 2021
8b0ef92
set BLAS_LIBRARIES to empty string to work around faiss' CMakeLists.txt
trxcllnt Nov 16, 2021
a167883
revert unneeded changes
trxcllnt Nov 16, 2021
1865b40
Merge branch 'branch-22.02' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Nov 18, 2021
d5b5c5d
fix merge conflict
trxcllnt Nov 20, 2021
b732c18
Merge branch 'branch-22.02' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Nov 20, 2021
e69f402
Merge branch 'branch-22.02' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Dec 1, 2021
1c6b000
Merge branch 'branch-22.02' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Dec 15, 2021
877faad
Merge branch 'branch-22.02' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Jan 6, 2022
6fa9197
Merge branch 'fix/build-shared-faiss' of github.com:trxcllnt/cugraph …
trxcllnt Jan 6, 2022
fddef0e
Merge branch 'branch-22.02' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Jan 11, 2022
b264da1
Merge branch 'branch-22.02' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Jan 13, 2022
db9e359
update copyright headers
trxcllnt Jan 13, 2022
300b0e4
switch to use Robert's branch
trxcllnt Jan 13, 2022
879223c
add get_gtest.cmake
trxcllnt Jan 14, 2022
23de039
Merge branch 'branch-22.02' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Jan 19, 2022
c65d2ff
set RAFT_COMPILE_LIBRARIES OFF in get_raft.cmake
trxcllnt Jan 19, 2022
a8a13f5
Merge branch 'branch-22.02' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Jan 20, 2022
bb815aa
Merge branch 'branch-22.02' of github.com:rapidsai/cugraph into fix/b…
trxcllnt Jan 22, 2022
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32 changes: 10 additions & 22 deletions build.sh
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
#!/bin/bash

# Copyright (c) 2019-2021, NVIDIA CORPORATION.
# Copyright (c) 2019-2022, NVIDIA CORPORATION.

# cugraph build script

Expand All @@ -20,7 +20,7 @@ REPODIR=$(cd $(dirname $0); pwd)
LIBCUGRAPH_BUILD_DIR=${LIBCUGRAPH_BUILD_DIR:=${REPODIR}/cpp/build}
LIBCUGRAPH_ETL_BUILD_DIR=${LIBCUGRAPH_ETL_BUILD_DIR:=${REPODIR}/cpp/libcugraph_etl/build}

VALIDARGS="clean uninstall libcugraph libcugraph_etl cugraph pylibcugraph cpp-mgtests docs -v -g -n --allgpuarch --buildfaiss --show_depr_warn --skip_cpp_tests -h --help"
VALIDARGS="clean uninstall libcugraph libcugraph_etl cugraph pylibcugraph cpp-mgtests docs -v -g -n --allgpuarch --skip_cpp_tests -h --help"
HELP="$0 [<target> ...] [<flag> ...]
where <target> is:
clean - remove all existing build artifacts and configuration (start over)
Expand All @@ -36,9 +36,7 @@ HELP="$0 [<target> ...] [<flag> ...]
-g - build for debug
-n - do not install after a successful build
--allgpuarch - build for all supported GPU architectures
--buildfaiss - build faiss statically into cugraph
--show_depr_warn - show cmake deprecation warnings
--skip_cpp_tests - do not build the SG test binaries as part of the libcugraph and libcugraph_etl targets
--skip_cpp_tests - do not build the SG test binaries as part of the libcugraph target
-h - print this text

default action (no args) is to build and install 'libcugraph' then 'libcugraph_etl' then 'pylibcugraph' then 'cugraph' then 'docs' targets
Expand All @@ -54,10 +52,8 @@ BUILD_DIRS="${LIBCUGRAPH_BUILD_DIR} ${LIBCUGRAPH_ETL_BUILD_DIR} ${CUGRAPH_BUILD_
VERBOSE_FLAG=""
BUILD_TYPE=Release
INSTALL_TARGET=install
BUILD_DISABLE_DEPRECATION_WARNING=ON
BUILD_CPP_TESTS=ON
BUILD_CPP_MG_TESTS=OFF
BUILD_STATIC_FAISS=OFF
BUILD_ALL_GPU_ARCH=0

# Set defaults for vars that may not have been defined externally
Expand Down Expand Up @@ -103,12 +99,6 @@ fi
if hasArg --allgpuarch; then
BUILD_ALL_GPU_ARCH=1
fi
if hasArg --buildfaiss; then
BUILD_STATIC_FAISS=ON
fi
if hasArg --show_depr_warn; then
BUILD_DISABLE_DEPRECATION_WARNING=OFF
fi
if hasArg --skip_cpp_tests; then
BUILD_CPP_TESTS=OFF
fi
Expand Down Expand Up @@ -180,14 +170,13 @@ if buildAll || hasArg libcugraph; then
fi
mkdir -p ${LIBCUGRAPH_BUILD_DIR}
cd ${LIBCUGRAPH_BUILD_DIR}
cmake -DCMAKE_INSTALL_PREFIX=${INSTALL_PREFIX} \
cmake -B "${LIBCUGRAPH_BUILD_DIR}" -S "${REPODIR}/cpp" \
-DCMAKE_INSTALL_PREFIX=${INSTALL_PREFIX} \
-DCMAKE_CUDA_ARCHITECTURES=${CUGRAPH_CMAKE_CUDA_ARCHITECTURES} \
-DDISABLE_DEPRECATION_WARNING=${BUILD_DISABLE_DEPRECATION_WARNING} \
-DCMAKE_BUILD_TYPE=${BUILD_TYPE} \
-DBUILD_STATIC_FAISS=${BUILD_STATIC_FAISS} \
-DBUILD_TESTS=${BUILD_CPP_TESTS} \
-DBUILD_CUGRAPH_MG_TESTS=${BUILD_CPP_MG_TESTS} \
${REPODIR}/cpp
-DBUILD_CUGRAPH_MG_TESTS=${BUILD_CPP_MG_TESTS}

cmake --build "${LIBCUGRAPH_BUILD_DIR}" -j${PARALLEL_LEVEL} --target ${INSTALL_TARGET} ${VERBOSE_FLAG}
fi

Expand Down Expand Up @@ -242,10 +231,9 @@ if buildAll || hasArg docs; then
if [ ! -d ${LIBCUGRAPH_BUILD_DIR} ]; then
mkdir -p ${LIBCUGRAPH_BUILD_DIR}
cd ${LIBCUGRAPH_BUILD_DIR}
cmake -DCMAKE_INSTALL_PREFIX=${INSTALL_PREFIX} \
-DDISABLE_DEPRECATION_WARNING=${BUILD_DISABLE_DEPRECATION_WARNING} \
-DCMAKE_BUILD_TYPE=${BUILD_TYPE} ${REPODIR}/cpp \
-DBUILD_STATIC_FAISS=${BUILD_STATIC_FAISS}
cmake -B "${LIBCUGRAPH_BUILD_DIR}" -S "${REPODIR}/cpp" \
-DCMAKE_INSTALL_PREFIX=${INSTALL_PREFIX} \
-DCMAKE_BUILD_TYPE=${BUILD_TYPE}
fi
cd ${LIBCUGRAPH_BUILD_DIR}
cmake --build "${LIBCUGRAPH_BUILD_DIR}" -j${PARALLEL_LEVEL} --target docs_cugraph ${VERBOSE_FLAG}
Expand Down
13 changes: 1 addition & 12 deletions ci/gpu/build.sh
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
#!/usr/bin/env bash
# Copyright (c) 2018-2021, NVIDIA CORPORATION.
# Copyright (c) 2018-2022, NVIDIA CORPORATION.
##########################################
# cuGraph GPU build & testscript for CI #
##########################################
Expand Down Expand Up @@ -94,17 +94,6 @@ if [[ -z "$PROJECT_FLASH" || "$PROJECT_FLASH" == "0" ]]; then
gpuci_logger "Build from source"
$WORKSPACE/build.sh -v clean libcugraph pylibcugraph cugraph
else
# ...cugraph/cpu/conda_work/... is the dir name when only 1 lib* library is
# present. For multiple libs (ie. libcugraph and libcugraph_etl), the
# "_work" dir is prefixed with the lib name.
export LIBCUGRAPH_BUILD_DIR="$WORKSPACE/ci/artifacts/cugraph/cpu/libcugraph_work/cpp/build"

# Faiss patch
echo "Update libcugraph.so"
cd $LIBCUGRAPH_BUILD_DIR
chrpath -d libcugraph.so
patchelf --replace-needed `patchelf --print-needed libcugraph.so | grep faiss` libfaiss.so libcugraph.so

CONDA_FILE=`find ${CONDA_ARTIFACT_PATH} -name "libcugraph*.tar.bz2"`
CONDA_FILE=`basename "$CONDA_FILE" .tar.bz2` #get filename without extension
CONDA_FILE=${CONDA_FILE//-/=} #convert to conda install
Expand Down
2 changes: 0 additions & 2 deletions conda/environments/cugraph_dev_cuda11.0.yml
Original file line number Diff line number Diff line change
Expand Up @@ -28,8 +28,6 @@ dependencies:
- boost
- cython>=0.29,<0.30
- pytest
- libfaiss=1.7.0
- faiss-proc=*=cuda
- scikit-learn>=0.23.1
- sphinx
- pydata-sphinx-theme
Expand Down
2 changes: 0 additions & 2 deletions conda/environments/cugraph_dev_cuda11.2.yml
Original file line number Diff line number Diff line change
Expand Up @@ -28,8 +28,6 @@ dependencies:
- boost
- cython>=0.29,<0.30
- pytest
- libfaiss=1.7.0
- faiss-proc=*=cuda
- scikit-learn>=0.23.1
- sphinx
- pydata-sphinx-theme
Expand Down
2 changes: 0 additions & 2 deletions conda/environments/cugraph_dev_cuda11.4.yml
Original file line number Diff line number Diff line change
Expand Up @@ -28,8 +28,6 @@ dependencies:
- boost
- cython>=0.29,<0.30
- pytest
- libfaiss=1.7.0
- faiss-proc=*=cuda
- scikit-learn>=0.23.1
- sphinx
- pydata-sphinx-theme
Expand Down
2 changes: 0 additions & 2 deletions conda/environments/cugraph_dev_cuda11.5.yml
Original file line number Diff line number Diff line change
Expand Up @@ -28,8 +28,6 @@ dependencies:
- boost
- cython>=0.29,<0.30
- pytest
- libfaiss=1.7.0
- faiss-proc=*=cuda
- scikit-learn>=0.23.1
- sphinx
- pydata-sphinx-theme
Expand Down
6 changes: 1 addition & 5 deletions conda/recipes/libcugraph/meta.yaml
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# Copyright (c) 2018-2021, NVIDIA CORPORATION.
# Copyright (c) 2018-2022, NVIDIA CORPORATION.

# Usage:
# conda build -c nvidia -c rapidsai -c conda-forge .
Expand Down Expand Up @@ -42,14 +42,10 @@ requirements:
- ucx-proc=*=gpu
- gtest
- gmock
- faiss-proc=*=cuda
- libfaiss 1.7.0 *_cuda
run:
- {{ pin_compatible('cudatoolkit', max_pin='x', min_pin='x') }}
- nccl>=2.9.9
- ucx-proc=*=gpu
- faiss-proc=*=cuda
- libfaiss 1.7.0 *_cuda
- libcusolver>=11.2.1

about:
Expand Down
63 changes: 24 additions & 39 deletions cpp/CMakeLists.txt
Original file line number Diff line number Diff line change
Expand Up @@ -55,7 +55,11 @@ endforeach()
# arch > 86
list(POP_BACK usable_arch_values latest_arch)
list(TRANSFORM usable_arch_values APPEND "-real")
list(APPEND usable_arch_values ${latest_arch})
if (usable_arch_values)
list(APPEND usable_arch_values ${latest_arch})
else()
list(APPEND usable_arch_values ${latest_arch}-real)
endif()

set(CMAKE_CUDA_ARCHITECTURES ${usable_arch_values})

Expand All @@ -73,8 +77,6 @@ rapids_cmake_build_type(Release)
# - User Options --------------------------------------------------------------

option(BUILD_CUGRAPH_MG_TESTS "Build cuGraph multigpu algorithm tests" OFF)
set(BLAS_LIBRARIES "" CACHE STRING "Location of BLAS library for FAISS build.")
option(BUILD_STATIC_FAISS "Build the FAISS library for nearest neighbors search on GPU" OFF)
option(CMAKE_CUDA_LINEINFO "Enable the -lineinfo option for nvcc (useful for cuda-memcheck / profiler" OFF)
option(BUILD_TESTS "Configure CMake to build tests" ON)

Expand Down Expand Up @@ -122,29 +124,29 @@ if(OpenMP_FOUND)
list(APPEND CUGRAPH_CUDA_FLAGS -Xcompiler=${OpenMP_CXX_FLAGS})
endif()


################################################################################
# - find blas ------------------------------------------------------------------

if(NOT DEFINED BLAS_LIBRARIES)
find_package( BLAS REQUIRED )
else()
message(STATUS "Manually setting BLAS to ${BLAS_LIBRARIES}")
endif()

################################################################################
# - find CPM based dependencies -----------------------------------------------
###################################################################################################
# - find CPM based dependencies ------------------------------------------------------------------

rapids_cpm_init()

include(cmake/thirdparty/get_thrust.cmake)
include(cmake/thirdparty/get_faiss.cmake)
include(cmake/thirdparty/get_nccl.cmake)
include(cmake/thirdparty/get_rmm.cmake)

###
# Linking to the `raft::raft` target implicitly links cugraph targets to the
# following public header-only raft dependencies:
# * RMM
# * Thrust
# * libcu++
# * GTest/GMock
# * cuCollections
#
# The CMakeLists.txt for each of these projects are properly configured
# to generate a build and install export-set, so reimplementing finding or
# fetching those targets in cuGraph is redundant (at best), and potentially
# error-prone if something about those targets change and our implementation
# lags behind.
###
include(cmake/thirdparty/get_raft.cmake)
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include(cmake/thirdparty/get_cuco.cmake)
include(cmake/thirdparty/get_nccl.cmake)
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raft also uses nccl. Is there a reason for including the nccl dependency here as well? Seems like if we're going to remove dependencies we inherit from raft we should not include nccl here.

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Yeah I agree, just wasn't successful at making raft's get_nccl.cmake export its NCCL::NCCL target. Could use some help from @robertmaynard here.

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It looks RAFT only optional uses nccl. Specifically only the comms components of RAFT require NCCL.

What RAFT should do is have finer grained targets ( raft_comm ) which allow you to bring in the NCCL dependency.

I expect that CUML would want to keep NCCL as an optional dependency of RAFT since they don't require it when building for single gpu.

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@ChuckHastings, isnt cugraph is still using the RAFT comms?

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Yes, cugraph uses the RAFT comms implementation.

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Ah, I misunderstood the original statement- you were saying cugraph should be getting nccl transitively through raft.

include(cmake/thirdparty/get_cuhornet.cmake)

if(BUILD_TESTS)
Expand Down Expand Up @@ -273,7 +275,6 @@ target_include_directories(cugraph
PRIVATE
"${CMAKE_CURRENT_SOURCE_DIR}/../thirdparty"
"${CMAKE_CURRENT_SOURCE_DIR}/src"
"${NCCL_INCLUDE_DIRS}"
PUBLIC
"$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}/include>"
"$<INSTALL_INTERFACE:include>"
Expand All @@ -283,17 +284,9 @@ target_include_directories(cugraph
# - link libraries -------------------------------------------------------------
target_link_libraries(cugraph
PUBLIC
rmm::rmm
cugraph::Thrust
raft::raft
PRIVATE
cuco::cuco
CUDA::cublas
CUDA::curand
CUDA::cusolver
CUDA::cusparse
cugraph::cuHornet
FAISS::FAISS
NCCL::NCCL
)

Expand Down Expand Up @@ -393,7 +386,6 @@ target_include_directories(cugraph_c
# - C-API link libraries -------------------------------------------------------
target_link_libraries(cugraph_c
PUBLIC
FAISS::FAISS
CUDA::cublas
CUDA::curand
CUDA::cusolver
Expand Down Expand Up @@ -446,17 +438,11 @@ cuGraph library is a collection of GPU accelerated graph algorithms that process

]=])

set(code_string
[=[
thrust_create_target(cugraph::Thrust FROM_OPTIONS)
]=])

rapids_export(INSTALL cugraph
rapids_export(INSTALL cugraph
EXPORT_SET cugraph-exports
GLOBAL_TARGETS cugraph cugraph_c
NAMESPACE cugraph::
DOCUMENTATION doc_string
FINAL_CODE_BLOCK code_string
)

################################################################################
Expand All @@ -466,7 +452,6 @@ rapids_export(BUILD cugraph
GLOBAL_TARGETS cugraph cugraph_c
NAMESPACE cugraph::
DOCUMENTATION doc_string
FINAL_CODE_BLOCK code_string
)

################################################################################
Expand Down
35 changes: 0 additions & 35 deletions cpp/cmake/thirdparty/get_cuco.cmake

This file was deleted.

53 changes: 0 additions & 53 deletions cpp/cmake/thirdparty/get_faiss.cmake

This file was deleted.

2 changes: 1 addition & 1 deletion cpp/cmake/thirdparty/get_gtest.cmake
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
#=============================================================================
# Copyright (c) 2021, NVIDIA CORPORATION.
# Copyright (c) 2021-2022, NVIDIA CORPORATION.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
Expand Down
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