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Setup pylibcudf package #16299

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Aug 16, 2024
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8430cec
Initial build setup for pylibcudf
lithomas1 Jul 15, 2024
06d4380
Merge branch 'branch-24.08' of github.com:rapidsai/cudf into setup-py…
lithomas1 Jul 17, 2024
7e6b540
sync and add devcontainer command
lithomas1 Jul 17, 2024
d3a23ce
add build scripts
lithomas1 Jul 18, 2024
a90417d
Merge branch 'branch-24.08' of github.com:rapidsai/cudf into setup-py…
lithomas1 Jul 18, 2024
1ecec47
cudf._lib.pylibcudf -> pylibcudf in tests
lithomas1 Jul 18, 2024
b7a2782
slim down dependencies [skip ci]
lithomas1 Jul 18, 2024
d6d91df
Merge branch 'branch-24.10' of github.com:rapidsai/cudf into setup-py…
lithomas1 Jul 30, 2024
b2306df
fixes
lithomas1 Jul 30, 2024
acb3122
fixes
lithomas1 Jul 30, 2024
5243eac
fix cuda suffixing
lithomas1 Jul 30, 2024
b2b68e1
maybe fix?
lithomas1 Jul 30, 2024
feac68d
rpath was the problem?
lithomas1 Jul 31, 2024
606d15e
put back mistakenly removed CMakeLists.txt
lithomas1 Jul 31, 2024
33be4ce
Merge branch 'branch-24.10' of github.com:rapidsai/cudf into setup-py…
lithomas1 Jul 31, 2024
8e5c00d
Fix merge conflicts
Matt711 Aug 1, 2024
bb4546b
Fix merge conflicts for real
Matt711 Aug 1, 2024
0336569
Import pylibcudf correctly
Matt711 Aug 1, 2024
a66d262
Merge branch 'branch-24.10' of github.com:rapidsai/cudf into setup-py…
lithomas1 Aug 2, 2024
50bd09f
last fixes
lithomas1 Aug 2, 2024
ca6a697
put back removed file
lithomas1 Aug 2, 2024
d011bbd
style checks
lithomas1 Aug 2, 2024
64a94e8
more
lithomas1 Aug 2, 2024
84e9107
maybe finish fixing my mess
lithomas1 Aug 2, 2024
86fc89e
try installing pylibcudf before build cudf
lithomas1 Aug 2, 2024
8662f8f
rework dependencies again
lithomas1 Aug 2, 2024
599c6b9
steal logic from libcudf C++ wheels CI script
lithomas1 Aug 2, 2024
0787a01
oops a typo
lithomas1 Aug 2, 2024
026d45a
assorted fixes
lithomas1 Aug 2, 2024
73ff5fb
fix dependencies again
lithomas1 Aug 2, 2024
07e9119
move variant into pylibcudf as well
lithomas1 Aug 2, 2024
99c0215
pyarrow.compute import adjustments
lithomas1 Aug 2, 2024
89e705f
go for green?
lithomas1 Aug 2, 2024
ae9a101
go for green take 2
lithomas1 Aug 2, 2024
4c33918
install pylibcudf more places
lithomas1 Aug 3, 2024
4274484
Merge branch 'branch-24.10' of github.com:rapidsai/cudf into setup-py…
lithomas1 Aug 5, 2024
d2de341
Merge branch 'branch-24.10' into setup-pylibcudf-package
Matt711 Aug 7, 2024
4de3f44
make conda packages for plc
Matt711 Aug 7, 2024
3be33da
change summary
Matt711 Aug 8, 2024
6e99637
Merge branch 'branch-24.10' into setup-pylibcudf-package
Matt711 Aug 8, 2024
83ca1c1
pylibcudf conda build
Matt711 Aug 8, 2024
f1aa4a5
Merge branch 'branch-24.10' into setup-pylibcudf-package
Matt711 Aug 12, 2024
1d913f0
clean recipe; remove find_package command
Matt711 Aug 12, 2024
a7b977a
add plc dep
Matt711 Aug 12, 2024
f6a7d9c
Merge branch 'branch-24.10' of github.com:rapidsai/cudf into setup-py…
lithomas1 Aug 12, 2024
234cd45
try changing find_package back
lithomas1 Aug 12, 2024
cb1b3f0
tweak scripts/recipes
lithomas1 Aug 12, 2024
10e9f89
fix docs and revert dependencies changes
lithomas1 Aug 13, 2024
0d7d4a7
remove unecessary run dep
Matt711 Aug 13, 2024
27b3711
Address reviews
Matt711 Aug 14, 2024
d5a8625
address comments
lithomas1 Aug 16, 2024
75d8af1
separate out cudf-polars change
lithomas1 Aug 16, 2024
293457d
Merge branch 'branch-24.10' of github.com:rapidsai/cudf into setup-py…
lithomas1 Aug 16, 2024
74c45bb
apply pre-commit
lithomas1 Aug 16, 2024
61ec5d0
fix test cudf script
lithomas1 Aug 16, 2024
eb8f70e
Update ci/test_wheel_cudf.sh
vyasr Aug 16, 2024
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2 changes: 1 addition & 1 deletion .github/labeler.yml
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ cudf.polars:
- 'python/cudf_polars/**'

pylibcudf:
- 'python/cudf/cudf/_lib/pylibcudf/**'
- 'python/cudf/pylibcudf/**'

libcudf:
- 'cpp/**'
Expand Down
12 changes: 10 additions & 2 deletions .github/workflows/pr.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -23,6 +23,7 @@ jobs:
- static-configure
- conda-notebook-tests
- docs-build
- wheel-build-pylibcudf
- wheel-build-cudf
- wheel-tests-cudf
- wheel-build-cudf-polars
Expand Down Expand Up @@ -120,10 +121,17 @@ jobs:
arch: "amd64"
container_image: "rapidsai/ci-conda:latest"
run_script: "ci/build_docs.sh"
wheel-build-cudf:
wheel-build-pylibcudf:
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needs: checks
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/[email protected]
with:
build_type: pull-request
script: "ci/build_wheel_pylibcudf.sh"
wheel-build-cudf:
needs: wheel-build-pylibcudf
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/[email protected]
with:
build_type: pull-request
script: "ci/build_wheel_cudf.sh"
Expand All @@ -135,7 +143,7 @@ jobs:
build_type: pull-request
script: ci/test_wheel_cudf.sh
wheel-build-cudf-polars:
needs: wheel-build-cudf
needs: wheel-build-pylibcudf
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/[email protected]
with:
Expand Down
15 changes: 12 additions & 3 deletions build.sh
Original file line number Diff line number Diff line change
Expand Up @@ -17,11 +17,12 @@ ARGS=$*
# script, and that this script resides in the repo dir!
REPODIR=$(cd $(dirname $0); pwd)

VALIDARGS="clean libcudf cudf cudfjar dask_cudf benchmarks tests libcudf_kafka cudf_kafka custreamz -v -g -n --pydevelop -l --allgpuarch --disable_nvtx --opensource_nvcomp --show_depr_warn --ptds -h --build_metrics --incl_cache_stats --disable_large_strings"
HELP="$0 [clean] [libcudf] [cudf] [cudfjar] [dask_cudf] [benchmarks] [tests] [libcudf_kafka] [cudf_kafka] [custreamz] [-v] [-g] [-n] [-h] [--cmake-args=\\\"<args>\\\"]
VALIDARGS="clean libcudf pylibcudf cudf cudfjar dask_cudf benchmarks tests libcudf_kafka cudf_kafka custreamz -v -g -n --pydevelop -l --allgpuarch --disable_nvtx --opensource_nvcomp --show_depr_warn --ptds -h --build_metrics --incl_cache_stats --disable_large_strings"
HELP="$0 [clean] [libcudf] [pylibcudf] [cudf] [cudfjar] [dask_cudf] [benchmarks] [tests] [libcudf_kafka] [cudf_kafka] [custreamz] [-v] [-g] [-n] [-h] [--cmake-args=\\\"<args>\\\"]
clean - remove all existing build artifacts and configuration (start
over)
libcudf - build the cudf C++ code only
pylibcudf - build the pylibcudf Python package
cudf - build the cudf Python package
cudfjar - build cudf JAR with static libcudf using devtoolset toolchain
dask_cudf - build the dask_cudf Python package
Expand Down Expand Up @@ -268,7 +269,7 @@ fi
################################################################################
# Configure, build, and install libcudf

if buildAll || hasArg libcudf || hasArg cudf || hasArg cudfjar; then
if buildAll || hasArg libcudf || hasArg pylibcudf || hasArg cudf || hasArg cudfjar; then
if (( ${BUILD_ALL_GPU_ARCH} == 0 )); then
CUDF_CMAKE_CUDA_ARCHITECTURES="${CUDF_CMAKE_CUDA_ARCHITECTURES:-NATIVE}"
if [[ "$CUDF_CMAKE_CUDA_ARCHITECTURES" == "NATIVE" ]]; then
Expand Down Expand Up @@ -340,6 +341,14 @@ if buildAll || hasArg libcudf; then
fi
fi

# Build and install the pylibcudf Python package
if buildAll || hasArg pylibcudf; then

cd ${REPODIR}/python/pylibcudf
SKBUILD_CMAKE_ARGS="-DCMAKE_PREFIX_PATH=${INSTALL_PREFIX};-DCMAKE_LIBRARY_PATH=${LIBCUDF_BUILD_DIR};-DCMAKE_CUDA_ARCHITECTURES=${CUDF_CMAKE_CUDA_ARCHITECTURES};${EXTRA_CMAKE_ARGS}" \
python ${PYTHON_ARGS_FOR_INSTALL} .
fi

# Build and install the cudf Python package
if buildAll || hasArg cudf; then

Expand Down
2 changes: 1 addition & 1 deletion ci/build_docs.sh
Original file line number Diff line number Diff line change
Expand Up @@ -29,7 +29,7 @@ PYTHON_CHANNEL=$(rapids-download-conda-from-s3 python)
rapids-mamba-retry install \
--channel "${CPP_CHANNEL}" \
--channel "${PYTHON_CHANNEL}" \
libcudf cudf dask-cudf
libcudf pylibcudf cudf dask-cudf

export RAPIDS_DOCS_DIR="$(mktemp -d)"

Expand Down
7 changes: 7 additions & 0 deletions ci/build_python.sh
Original file line number Diff line number Diff line change
Expand Up @@ -22,9 +22,16 @@ CPP_CHANNEL=$(rapids-download-conda-from-s3 cpp)
# TODO: Remove `--no-test` flag once importing on a CPU
# node works correctly
# With boa installed conda build forwards to the boa builder

RAPIDS_PACKAGE_VERSION=$(head -1 ./VERSION) rapids-conda-retry mambabuild \
--no-test \
--channel "${CPP_CHANNEL}" \
conda/recipes/pylibcudf

RAPIDS_PACKAGE_VERSION=$(head -1 ./VERSION) rapids-conda-retry mambabuild \
--no-test \
--channel "${CPP_CHANNEL}" \
--channel "${RAPIDS_CONDA_BLD_OUTPUT_DIR}" \
conda/recipes/cudf

RAPIDS_PACKAGE_VERSION=$(head -1 ./VERSION) rapids-conda-retry mambabuild \
Expand Down
8 changes: 6 additions & 2 deletions ci/build_wheel_cudf.sh
Original file line number Diff line number Diff line change
Expand Up @@ -7,10 +7,14 @@ package_dir="python/cudf"

export SKBUILD_CMAKE_ARGS="-DUSE_LIBARROW_FROM_PYARROW=ON"

# Download the pylibcudf built in the previous step
RAPIDS_PY_CUDA_SUFFIX="$(rapids-wheel-ctk-name-gen ${RAPIDS_CUDA_VERSION})"
RAPIDS_PY_WHEEL_NAME="pylibcudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-download-wheels-from-s3 /tmp/pylibcudf_dist

echo "pylibcudf-${RAPIDS_PY_CUDA_SUFFIX} @ file://$(echo /tmp/pylibcudf_dist/pylibcudf_*.whl)" > /tmp/constraints.txt
export PIP_CONSTRAINT="/tmp/constraints.txt"
./ci/build_wheel.sh ${package_dir}

python -m auditwheel repair -w ${package_dir}/final_dist ${package_dir}/dist/*


RAPIDS_PY_CUDA_SUFFIX="$(rapids-wheel-ctk-name-gen ${RAPIDS_CUDA_VERSION})"
RAPIDS_PY_WHEEL_NAME="cudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-upload-wheels-to-s3 ${package_dir}/final_dist
16 changes: 16 additions & 0 deletions ci/build_wheel_pylibcudf.sh
Original file line number Diff line number Diff line change
@@ -0,0 +1,16 @@
#!/bin/bash
# Copyright (c) 2023-2024, NVIDIA CORPORATION.

set -euo pipefail

package_dir="python/pylibcudf"

export SKBUILD_CMAKE_ARGS="-DUSE_LIBARROW_FROM_PYARROW=ON"

./ci/build_wheel.sh ${package_dir}

python -m auditwheel repair -w ${package_dir}/final_dist ${package_dir}/dist/*


RAPIDS_PY_CUDA_SUFFIX="$(rapids-wheel-ctk-name-gen ${RAPIDS_CUDA_VERSION})"
RAPIDS_PY_WHEEL_NAME="pylibcudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-upload-wheels-to-s3 ${package_dir}/final_dist
2 changes: 2 additions & 0 deletions ci/cudf_pandas_scripts/pandas-tests/run.sh
Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,9 @@ rapids-logger "Running Pandas tests using $PANDAS_TESTS_BRANCH branch and rapids
rapids-logger "PR number: ${RAPIDS_REF_NAME:-"unknown"}"

RAPIDS_PY_CUDA_SUFFIX="$(rapids-wheel-ctk-name-gen ${RAPIDS_CUDA_VERSION})"
RAPIDS_PY_WHEEL_NAME="pylibcudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-download-wheels-from-s3 ./local-pylibcudf-dep
RAPIDS_PY_WHEEL_NAME="cudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-download-wheels-from-s3 ./local-cudf-dep
python -m pip install $(ls ./local-pylibcudf-dep/pylibcudf*.whl)
python -m pip install $(ls ./local-cudf-dep/cudf*.whl)[test,pandas-tests]

RESULTS_DIR=${RAPIDS_TESTS_DIR:-"$(mktemp -d)"}
Expand Down
2 changes: 2 additions & 0 deletions ci/cudf_pandas_scripts/run_tests.sh
Original file line number Diff line number Diff line change
Expand Up @@ -36,7 +36,9 @@ if [ "$no_cudf" = true ]; then
echo "Skipping cudf install"
else
RAPIDS_PY_CUDA_SUFFIX="$(rapids-wheel-ctk-name-gen ${RAPIDS_CUDA_VERSION})"
RAPIDS_PY_WHEEL_NAME="pylibcudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-download-wheels-from-s3 ./local-pylibcudf-dep
RAPIDS_PY_WHEEL_NAME="cudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-download-wheels-from-s3 ./local-cudf-dep
python -m pip install $(ls ./local-pylibcudf-dep/pylibcudf*.whl)
python -m pip install $(ls ./local-cudf-dep/cudf*.whl)[test,cudf-pandas-tests]
fi

Expand Down
2 changes: 1 addition & 1 deletion ci/test_python_cudf.sh
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@ trap "EXITCODE=1" ERR
set +e

rapids-logger "pytest pylibcudf"
pushd python/cudf/cudf/pylibcudf_tests
pushd python/pylibcudf/pylibcudf/tests
python -m pytest \
--cache-clear \
--dist=worksteal \
Expand Down
12 changes: 8 additions & 4 deletions ci/test_wheel_cudf.sh
Original file line number Diff line number Diff line change
Expand Up @@ -3,19 +3,23 @@

set -eou pipefail

# Download the pylibcudf built in the previous step
RAPIDS_PY_CUDA_SUFFIX="$(rapids-wheel-ctk-name-gen ${RAPIDS_CUDA_VERSION})"
RAPIDS_PY_WHEEL_NAME="cudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-download-wheels-from-s3 ./dist
rapids-download-wheels-from-s3 ./local-pylibcudf-dep "pylibcudf_${RAPIDS_PY_CUDA_SUFFIX}"
rapids-download-wheels-from-s3 ./dist "cudf_${RAPIDS_PY_CUDA_SUFFIX}"
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# echo to expand wildcard before adding `[extra]` requires for pip
python -m pip install $(echo ./dist/cudf*.whl)[test]
# Install both pylibcudf and cudf
python -m pip install \
"$(echo ./local-pylibcudf-dep/pylibcudf*.whl" \
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"$(echo ./dist/cudf*.whl)[test]"

RESULTS_DIR=${RAPIDS_TESTS_DIR:-"$(mktemp -d)"}
RAPIDS_TESTS_DIR=${RAPIDS_TESTS_DIR:-"${RESULTS_DIR}/test-results"}/
mkdir -p "${RAPIDS_TESTS_DIR}"


rapids-logger "pytest pylibcudf"
pushd python/cudf/cudf/pylibcudf_tests
pushd python/pylibcudf/pylibcudf/tests
python -m pytest \
--cache-clear \
--dist=worksteal \
Expand Down
6 changes: 3 additions & 3 deletions ci/test_wheel_cudf_polars.sh
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ set -eou pipefail
# files in cudf_polars/pylibcudf", rather than "are there changes
# between upstream and this branch which touch cudf_polars/pylibcudf"
# TODO: is the target branch exposed anywhere in an environment variable?
if [ -n "$(git diff --name-only origin/branch-24.10...HEAD -- python/cudf_polars/ python/cudf/cudf/_lib/pylibcudf/)" ];
if [ -n "$(git diff --name-only origin/branch-24.10...HEAD -- python/cudf_polars/ python/pylibcudf/)" ];
then
HAS_CHANGES=1
else
Expand All @@ -21,8 +21,8 @@ RAPIDS_PY_CUDA_SUFFIX="$(rapids-wheel-ctk-name-gen ${RAPIDS_CUDA_VERSION})"
RAPIDS_PY_WHEEL_NAME="cudf_polars_${RAPIDS_PY_CUDA_SUFFIX}" RAPIDS_PY_WHEEL_PURE="1" rapids-download-wheels-from-s3 ./dist

# Download the cudf built in the previous step
RAPIDS_PY_WHEEL_NAME="cudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-download-wheels-from-s3 ./local-cudf-dep
python -m pip install ./local-cudf-dep/cudf*.whl
RAPIDS_PY_WHEEL_NAME="pylibcudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-download-wheels-from-s3 ./local-pylibcudf-dep
python -m pip install ./local-pylibcudf-dep/pylibcudf*.whl

rapids-logger "Install cudf_polars"
python -m pip install $(echo ./dist/cudf_polars*.whl)[test]
Expand Down
5 changes: 4 additions & 1 deletion ci/test_wheel_dask_cudf.sh
Original file line number Diff line number Diff line change
Expand Up @@ -7,8 +7,11 @@ RAPIDS_PY_CUDA_SUFFIX="$(rapids-wheel-ctk-name-gen ${RAPIDS_CUDA_VERSION})"
RAPIDS_PY_WHEEL_NAME="dask_cudf_${RAPIDS_PY_CUDA_SUFFIX}" RAPIDS_PY_WHEEL_PURE="1" rapids-download-wheels-from-s3 ./dist

# Download the cudf built in the previous step
RAPIDS_PY_WHEEL_NAME="pylibcudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-download-wheels-from-s3 ./local-pylibcudf-dep
RAPIDS_PY_WHEEL_NAME="cudf_${RAPIDS_PY_CUDA_SUFFIX}" rapids-download-wheels-from-s3 ./local-cudf-dep
python -m pip install ./local-cudf-dep/cudf*.whl
python -m pip install \
"$(echo ./local-pylibcudf-dep/pylibcudf*.whl)" \
"$(echo ./local-cudf-dep/cudf*.whl)"

# echo to expand wildcard before adding `[extra]` requires for pip
python -m pip install $(echo ./dist/dask_cudf*.whl)[test]
Expand Down
2 changes: 2 additions & 0 deletions conda/environments/all_cuda-118_arch-x86_64.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -56,12 +56,14 @@ dependencies:
- ninja
- notebook
- numba>=0.57
- numpy
- numpy>=1.23,<2.0a0
- numpydoc
- nvcc_linux-64=11.8
- nvcomp==3.0.6
- nvtx>=0.2.1
- packaging
- pandas
- pandas>=2.0,<2.2.3dev0
- pandoc
- pip
Expand Down
2 changes: 2 additions & 0 deletions conda/environments/all_cuda-125_arch-x86_64.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -55,11 +55,13 @@ dependencies:
- ninja
- notebook
- numba>=0.57
- numpy
- numpy>=1.23,<2.0a0
- numpydoc
- nvcomp==3.0.6
- nvtx>=0.2.1
- packaging
- pandas
- pandas>=2.0,<2.2.3dev0
- pandoc
- pip
Expand Down
2 changes: 2 additions & 0 deletions conda/recipes/cudf/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -68,6 +68,7 @@ requirements:
- numpy 1.23
- pyarrow ==16.1.0.*
- libcudf ={{ version }}
- pylibcudf ={{ version }}
- rmm ={{ minor_version }}
{% if cuda_major == "11" %}
- cudatoolkit
Expand All @@ -87,6 +88,7 @@ requirements:
- numpy >=1.23,<2.0a0
- {{ pin_compatible('pyarrow', max_pin='x.x') }}
- libcudf ={{ version }}
- pylibcudf ={{ version }}
- {{ pin_compatible('rmm', max_pin='x.x') }}
- fsspec >=0.6.0
{% if cuda_major == "11" %}
Expand Down
4 changes: 2 additions & 2 deletions conda/recipes/cudf_kafka/meta.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -58,7 +58,7 @@ requirements:
- python
- cython >=3.0.3
- cuda-version ={{ cuda_version }}
- cudf ={{ version }}
- pylibcudf ={{ version }}
- libcudf_kafka ={{ version }}
- rapids-build-backend >=0.3.0,<0.4.0.dev0
- scikit-build-core >=0.10.0
Expand All @@ -69,7 +69,7 @@ requirements:
- python
- {{ pin_compatible('cuda-version', max_pin='x', min_pin='x') }}
- libcudf_kafka ={{ version }}
- cudf ={{ version }}
- pylibcudf ={{ version }}
{% if cuda_major != "11" %}
- cuda-cudart
{% endif %}
Expand Down
4 changes: 4 additions & 0 deletions conda/recipes/pylibcudf/build.sh
Original file line number Diff line number Diff line change
@@ -0,0 +1,4 @@
# Copyright (c) 2018-2024, NVIDIA CORPORATION.

# This assumes the script is executed from the root of the repo directory
./build.sh pylibcudf
20 changes: 20 additions & 0 deletions conda/recipes/pylibcudf/conda_build_config.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,20 @@
c_compiler_version:
- 11

cxx_compiler_version:
- 11

c_stdlib:
- sysroot

c_stdlib_version:
- "2.17"

cmake_version:
- ">=3.26.4,!=3.30.0"

cuda_compiler:
- cuda-nvcc

cuda11_compiler:
- nvcc
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