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merging latest master branch#15

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jesperswillem merged 6 commits intoyannick_developqusers/qligfep:yannick_developfrom masterqusers/qligfep:masterCopy head branch name to clipboardAug 24, 2023

+1,163-198

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Commits on Aug 17, 2023

• Solved issues with output mpi/mpp when using different clusters

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• Added template

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• Commands updated, more information about FEP and more in detail tutorial

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• added python script to call analyze_FEP on every "FEP_" folder

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• Setup now moves files needed from different folders, renames folder in case name is already taken. also adds cys bond from protein.pdb

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• Merge pull request #14 from afloresep/pull-req

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