replace scipy.stats.kde with scipy.stats

scipy.stats.kde is deprecated
quaquel · May 19, 2022 · b5a9ca9 · b5a9ca9
1 parent e8fbf6f
commit b5a9ca9
Show file tree

Hide file tree

Showing 2 changed files with 4 additions and 3 deletions.
diff --git a/ema_workbench/analysis/plotting_util.py b/ema_workbench/analysis/plotting_util.py
@@ -11,7 +11,7 @@
 import matplotlib.pyplot as plt
 import numpy as np
 import pandas as pd
-import scipy.stats.kde as kde
+import scipy.stats as stats
 import seaborn as sns
 
 from ..em_framework.outcomes import AbstractOutcome, ScalarOutcome
@@ -481,7 +481,7 @@ def determine_kde(data, size_kde=1000, ymin=None, ymax=None):
     kde_y = np.linspace(ymin, ymax, size_kde)
 
     try:
-        kde_x = kde.gaussian_kde(data)
+        kde_x = stats.gaussian_kde(data)
         kde_x = kde_x.evaluate(kde_y)
     #         grid = GridSearchCV(KernelDensity(kernel='gaussian'),
     #                             {'bandwidth': np.linspace(ymin, ymax, 20)},
@@ -899,4 +899,4 @@ def get_color(index):
     is higher than the legnth of the color list
     """
     corrected_index = index % len(COLOR_LIST)
-    return COLOR_LIST[corrected_index]
+    return COLOR_LIST[corrected_index]
diff --git a/todo.md b/todo.md
@@ -5,6 +5,7 @@
 * timeseries outcomes via pandas dataframe
 * remove threshold kwarg from prim
 * add OrdinalParameter class
+* properly use ABC instead of raising NotImplementedError