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@qiime2

QIIME 2

Welcome to the QIIME 2 GitHub Organization! 👋

If you're a QIIME 2 user or developer, or are thinking about becoming one, refer to our Support Guidelines for details on how to learn or get help with QIIME 2.

If you're interested in contributing to repositories in the qiime2 GitHub organization, please start by reading our Contributing Guidelines.

This organization is primarily managed by the Caporaso Lab at Northern Arizona University, but has contributors from all over the world. If you have questions that aren't covered in the resources above, the best way to reach us is on the QIIME 2 Forum - it's where we hang out.

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  1. qiime2 qiime2 Public

    Official repository for the QIIME 2 framework.

    Python 483 241

  2. distributions distributions Public

    Makefile 1 5

  3. q2cli q2cli Public

    Command line interface for QIIME 2

    Python 19 24

  4. docs docs Public

    Python 21 58

Repositories

Showing 10 of 74 repositories
  • library Public

    A website for sharing QIIME 2 Plugins

    qiime2/library’s past year of commit activity
    Svelte 0 BSD-3-Clause 1 3 0 Updated Jan 20, 2025
  • distributions Public
    qiime2/distributions’s past year of commit activity
    Makefile 1 BSD-3-Clause 5 5 2 Updated Jan 19, 2025
  • qiime2 Public

    Official repository for the QIIME 2 framework.

    qiime2/qiime2’s past year of commit activity
    Python 483 BSD-3-Clause 241 63 (5 issues need help) 8 Updated Jan 18, 2025
  • q2templates Public

    Design template package for QIIME 2 Plugins

    qiime2/q2templates’s past year of commit activity
    Python 4 BSD-3-Clause 15 0 0 Updated Jan 18, 2025
  • q2galaxy Public

    Generate Galaxy tool descriptions automatically from QIIME 2 actions.

    qiime2/q2galaxy’s past year of commit activity
    Python 19 BSD-3-Clause 18 10 0 Updated Jan 18, 2025
  • q2cli Public

    Command line interface for QIIME 2

    qiime2/q2cli’s past year of commit activity
    Python 19 BSD-3-Clause 24 14 1 Updated Jan 18, 2025
  • q2-vsearch Public

    vsearch plugin for QIIME 2

    qiime2/q2-vsearch’s past year of commit activity
    Python 6 BSD-3-Clause 20 10 2 Updated Jan 18, 2025
  • q2-vizard Public

    The first choice of wizard lizards for interactive, generalized microbiome data visualization!

    qiime2/q2-vizard’s past year of commit activity
    Python 1 BSD-3-Clause 9 6 1 Updated Jan 18, 2025
  • q2-types Public
    qiime2/q2-types’s past year of commit activity
    Python 17 BSD-3-Clause 41 26 (3 issues need help) 3 Updated Jan 18, 2025
  • q2-taxa Public
    qiime2/q2-taxa’s past year of commit activity
    Python 3 BSD-3-Clause 29 43 0 Updated Jan 18, 2025