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Hello, I was having difficulty because it seemed flake8 didn't notice my settings, so I figured out that the pylsp flake8 plugin wasn't necessarily running in the correct directory, and also was telling all the plugins the filename was 'stdin' instead of the filename of the file
This also fixes the flake8 plugin when used with https://github.com/adamchainz/flake8-no-pep420 so that it doesn't complain all the files are in an implicit namespace