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Create a benchmarks module #470

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fc1b06d
Ability to start MCMC sampling from the same warmup state
neerajprad Nov 27, 2019
2f61661
add to fori_collect doc
neerajprad Nov 27, 2019
a756dae
address comment
neerajprad Nov 28, 2019
9a5e7cf
address comment in fori_loop
neerajprad Nov 28, 2019
3ec315b
address comments
neerajprad Nov 28, 2019
6be4130
reset state.i to 0 to avoid confusion
neerajprad Nov 28, 2019
f1afab7
make summary diagnostic (#468)
fehiepsi Nov 27, 2019
8331c50
Create benchmarks module
neerajprad Nov 28, 2019
c469c8b
rebase changes from reuse-warmup
neerajprad Nov 28, 2019
be42ae5
use correct invocation
neerajprad Nov 28, 2019
b421274
add hmm numpyro and x64 flag
fehiepsi Nov 28, 2019
4a7c36b
Merge branch 'master' into benchmarks
neerajprad Nov 28, 2019
3c18988
add seed and Pyro/Stan hmm
fehiepsi Nov 28, 2019
20a8381
Merge remote-tracking branch 'upstream/benchmarks' into benchmarks
fehiepsi Nov 28, 2019
f6706d4
Merge remote-tracking branch 'upstream/master' into benchmarks
fehiepsi Nov 29, 2019
a253b99
add patch for pyro to capture n_eff
fehiepsi Nov 29, 2019
03f2613
Merge branch 'master' into benchmarks
neerajprad Nov 29, 2019
5f804c3
add bash script
neerajprad Nov 29, 2019
4c92bd6
Merge branch 'master' into benchmarks
neerajprad Nov 29, 2019
bf66ecf
comment out progress bar
neerajprad Nov 29, 2019
22fe145
commit test
neerajprad Nov 29, 2019
6f03cad
Merge branch 'master' into benchmarks
neerajprad Dec 2, 2019
5accd84
Merge branch 'master' into benchmarks
neerajprad Dec 3, 2019
2c52d38
update sparse reg example
neerajprad Dec 3, 2019
7b4baea
update driver script
neerajprad Dec 3, 2019
5dbce09
change hyperparameters of sparse regression:
fehiepsi Dec 3, 2019
5bb7a59
add hmm script
fehiepsi Dec 3, 2019
6cf372d
add edward2 nuts implementation
fehiepsi Dec 3, 2019
616146d
add requirement file
fehiepsi Dec 3, 2019
6858c24
Merge remote-tracking branch 'upstream/master' into benchmarks
fehiepsi Dec 3, 2019
4dd52ad
add covtype example with pyro, numpyro, stan
fehiepsi Dec 3, 2019
85c352f
add covtype run file
fehiepsi Dec 3, 2019
22f3bed
add edward2 code
fehiepsi Dec 3, 2019
06a21f3
all examples are running now
fehiepsi Dec 4, 2019
da50381
use numpyro 0.2.3
fehiepsi Dec 6, 2019
0c484b5
final scripts
fehiepsi Dec 8, 2019
632b53d
Merge remote-tracking branch 'upstream/master' into benchmarks
fehiepsi Dec 8, 2019
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1 change: 1 addition & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -17,6 +17,7 @@ notebooks/source/examples/

# data files
*.pdf
benchmarks/.data
numpyro/examples/.data
examples/.results
examples/*.pdf
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Empty file added benchmarks/__init__.py
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