Bump phonopy from 2.26.6 to 2.33.0

[dependabot]

Bumps phonopy from 2.26.6 to 2.33.0.

Changelog

Sourced from phonopy's changelog.

Dec-12-2024: Version 2.33.0

• The default choice for storing atomic pair vectors in the Primitive class has been updated. Previously, the API had store_dense_svecs=False as the default, but now it is store_dense_svecs=True.

Dec-5-2024: Version 2.32.0

• Maintenance release including refactoring of SSCHA interface

Nov-30-2024: Version 2.31.2

• INCLUDE_BORN tag and --include-born option were removed. NAC params are always included in phonopy.yaml when they are available.

Nov-28-2024: Version 2.31.1

• Experimental implementation of SSCHA using pypolymlp and symfc.

Nov-13-2024: Version 2.31.0

• Maintenance release along with refactoring of MLP interface.

Nov-13-2024: Version 2.30.1

• Release for attempting conda-forge packaging except for a few very minor change.

Nov-9-2024: Version 2.30.0

• The symfc package (https://github.com/symfc/symfc) was made a necessary package from this version.
• Default force constants calculator for phonopy-load command was changed to symfc. The previous behaviour is recovered by phonopy-load --fc-calculator traditional.

Oct-25-2024: Version 2.29.1

• Release for conda-forge packaging.

Oct-22-2024: Version 2.29.0

• Maintenance release including minor fixes and updates.

Sep-12-2024: Version 2.28.0

• Maintenance release including minor fixes and updates.

Aug-23-2024: Version 2.27.0

... (truncated)

Commits

• 439961e Merge branch 'develop'
• 95babd9 Merge pull request #475 from phonopy/release
• a49b05f Set version 2.33.0
• 07495ef Merge pull request #474 from phonopy/store_dense_svecs_true
• 1c200f9 Update ShortestPairs test following a parameter default change
• 33951f1 Made store_dense_svecs=True as default setting
• dcc9abd Fix alm option in FCSolver
• 608a682 Merge pull request #473 from phonopy/refactor-fc
• c38fd28 Refactoring of FC solver interface
• f062e24 Merge pull request #472 from phonopy/refactor-fc
• Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

---

Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

• @dependabot rebase will rebase this PR
• @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
• @dependabot merge will merge this PR after your CI passes on it
• @dependabot squash and merge will squash and merge this PR after your CI passes on it
• @dependabot cancel merge will cancel a previously requested merge and block automerging
• @dependabot reopen will reopen this PR if it is closed
• @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
• @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
• @dependabot ignore this major version will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself)
• @dependabot ignore this minor version will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself)
• @dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

[coderabbitai]

Important

Review skipped

Bot user detected.

To trigger a single review, invoke the @coderabbitai review command.

You can disable this status message by setting the reviews.review_status to false in the CodeRabbit configuration file.

---

Note

🎁 Summarized by CodeRabbit Free

Your organization is on the Free plan. CodeRabbit will generate a high-level summary and a walkthrough for each pull request. For a comprehensive line-by-line review, please upgrade your subscription to CodeRabbit Pro by visiting https://app.coderabbit.ai/login.

🪧 Tips

Chat

There are 3 ways to chat with CodeRabbit:

• Review comments: Directly reply to a review comment made by CodeRabbit. Example:
  • I pushed a fix in commit <commit_id>, please review it.
  • Generate unit testing code for this file.
  • Open a follow-up GitHub issue for this discussion.
• Files and specific lines of code (under the "Files changed" tab): Tag @coderabbitai in a new review comment at the desired location with your query. Examples:
  • @coderabbitai generate unit testing code for this file.
  • @coderabbitai modularize this function.
• PR comments: Tag @coderabbitai in a new PR comment to ask questions about the PR branch. For the best results, please provide a very specific query, as very limited context is provided in this mode. Examples:
  • @coderabbitai gather interesting stats about this repository and render them as a table. Additionally, render a pie chart showing the language distribution in the codebase.
  • @coderabbitai read src/utils.ts and generate unit testing code.
  • @coderabbitai read the files in the src/scheduler package and generate a class diagram using mermaid and a README in the markdown format.
  • @coderabbitai help me debug CodeRabbit configuration file.

Note: Be mindful of the bot's finite context window. It's strongly recommended to break down tasks such as reading entire modules into smaller chunks. For a focused discussion, use review comments to chat about specific files and their changes, instead of using the PR comments.

CodeRabbit Commands (Invoked using PR comments)

• @coderabbitai pause to pause the reviews on a PR.
• @coderabbitai resume to resume the paused reviews.
• @coderabbitai review to trigger an incremental review. This is useful when automatic reviews are disabled for the repository.
• @coderabbitai full review to do a full review from scratch and review all the files again.
• @coderabbitai summary to regenerate the summary of the PR.
• @coderabbitai generate docstrings to generate docstrings for this PR. (Experiment)
• @coderabbitai resolve resolve all the CodeRabbit review comments.
• @coderabbitai configuration to show the current CodeRabbit configuration for the repository.
• @coderabbitai help to get help.

Other keywords and placeholders

• Add @coderabbitai ignore anywhere in the PR description to prevent this PR from being reviewed.
• Add @coderabbitai summary to generate the high-level summary at a specific location in the PR description.
• Add @coderabbitai anywhere in the PR title to generate the title automatically.

CodeRabbit Configuration File (.coderabbit.yaml)

• You can programmatically configure CodeRabbit by adding a .coderabbit.yaml file to the root of your repository.
• Please see the configuration documentation for more information.
• If your editor has YAML language server enabled, you can add the path at the top of this file to enable auto-completion and validation: # yaml-language-server: $schema=https://coderabbit.ai/integrations/schema.v2.json

Documentation and Community

• Visit our Documentation for detailed information on how to use CodeRabbit.
• Join our Discord Community to get help, request features, and share feedback.
• Follow us on X/Twitter for updates and announcements.

[dependabot]

Superseded by #374.