Refactor, add tests and support for pixel data interface v2 #66
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: unit-tests | |
on: | |
push: | |
branches: [ main ] | |
pull_request: | |
jobs: | |
ubuntu: | |
runs-on: ubuntu-latest | |
timeout-minutes: 10 | |
strategy: | |
fail-fast: false | |
matrix: | |
python-version: ['3.8', '3.9', '3.10', '3.11', '3.12'] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install package and dependencies | |
run: | | |
python -m pip install -U pip | |
python -m pip install -U wheel pytest coverage pytest-cov | |
python -m pip install git+https://github.com/pydicom/pylibjpeg-data | |
python -m pip install . | |
- name: Run pytest with no plugins | |
run: | | |
pytest --cov=pylibjpeg --cov-append | |
- name: Rerun pytest with pydicom and no plugins | |
run: | | |
pip install pydicom | |
pytest --cov=pylibjpeg --cov-append | |
- name: Rerun pytest with -lj plugin | |
run: | | |
pip install git+https://github.com/pydicom/pylibjpeg-libjpeg | |
pytest --cov=pylibjpeg --cov-append | |
- name: Rerun pytest with -oj plugin | |
run: | | |
pip uninstall -y pylibjpeg-libjpeg | |
pip install git+https://github.com/pydicom/pylibjpeg-openjpeg | |
pytest --cov=pylibjpeg --cov-append | |
- name: Rerun pytest with -rle plugin | |
run: | | |
pip uninstall -y pylibjpeg-libjpeg pylibjpeg-openjpeg | |
pip install git+https://github.com/pydicom/pylibjpeg-rle | |
pytest --cov=pylibjpeg --cov-append | |
- name: Rerun pytest with all plugins | |
run: | | |
pip install .[all] | |
pytest --cov=pylibjpeg --cov-append | |
- name: Send coverage results | |
if: ${{ success() }} | |
uses: codecov/codecov-action@v3 |