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The Prince Laboratory: Mass spectrometry omics (proteomics, lipidomics, and metabolomics)

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  1. narray narray Public

    Forked from masa16/narray

    Ruby/NArray : N-dimensional Numerical Array for Ruby

    C 16

  2. mspire mspire Public

    mass spectrometry proteomics in ruby

    Ruby 11 4

  3. savgol savgol Public

    Implements Savitzky-Golay filters in ruby (and eventually in NMatrix)

    Ruby 11 5

  4. rubabel rubabel Public

    Ruby interface to the OpenBabel ruby bindings similar to pybel

    Ruby 9 6

  5. gene_ontology gene_ontology Public

    simple class for working with GO (gene ontology); also see Bio::GO classes in bioruby

    Ruby 6 3

  6. mspire-simulator mspire-simulator Public

    Options Builder

    Ruby 6 1

Repositories

Showing 10 of 59 repositories
  • savgol Public

    Implements Savitzky-Golay filters in ruby (and eventually in NMatrix)

    princelab/savgol’s past year of commit activity
    Ruby 11 5 0 1 Updated Jun 20, 2018
  • gene_ontology Public

    simple class for working with GO (gene ontology); also see Bio::GO classes in bioruby

    princelab/gene_ontology’s past year of commit activity
    Ruby 6 3 0 0 Updated Dec 4, 2017
  • rubabel Public

    Ruby interface to the OpenBabel ruby bindings similar to pybel

    princelab/rubabel’s past year of commit activity
    Ruby 9 6 1 0 Updated Aug 24, 2015
  • lipid_classifier Public

    Lipid classification tool

    princelab/lipid_classifier’s past year of commit activity
    Ruby 5 AGPL-3.0 2 1 0 Updated Sep 4, 2014
  • mspire-envelope_extractor Public

    Extract isotope envelopes for protein turnover studies

    princelab/mspire-envelope_extractor’s past year of commit activity
    Ruby 0 0 0 0 Updated Sep 2, 2014
  • mspire-centroider Public

    centroid profile spectra

    princelab/mspire-centroider’s past year of commit activity
    Ruby 1 0 0 0 Updated Sep 2, 2014
  • ruby-emass Public

    A pure ruby implementation of the Perttu Haimi's implementation of the Rockwood & Haimi 2006 JASMS "Efficient Calculation of Accurate Masses of Isotopic Peaks" method.

    princelab/ruby-emass’s past year of commit activity
    Ruby 0 0 0 0 Updated Aug 23, 2014
  • mspire-lipid Public

    for working with mass spectrometry lipidomics data (right now shotgun style data)

    princelab/mspire-lipid’s past year of commit activity
    Ruby 1 0 0 0 Updated Aug 14, 2014
  • mspire-molecular_formula Public

    mspire library to handle molecular formulas (including an optional charge state), complete with relevant chemical properties such as mass, m/z, and isotope distribution.

    princelab/mspire-molecular_formula’s past year of commit activity
    Ruby 0 0 0 0 Updated Aug 3, 2014
  • mspire Public

    mass spectrometry proteomics in ruby

    princelab/mspire’s past year of commit activity
    Ruby 11 4 2 0 Updated Aug 3, 2014
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