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A Python app to display NHSN data (fraction reporting and weekly admission data)

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NHSN Streamlit App

A Python app to display up-to-date NHSN data, including:

  • Fraction Reporting
  • Weekly Admission Data

Setting Up the Environment

To run this app, you need to create a Python environment using conda or venv.

Required Python Packages:

  • streamlit
  • numpy
  • matplotlib
  • pandas
  • datetime
  • epiweeks
  • plotly
  1. Create and Activate the Environment:

    • Using conda:
      conda create -n nhsn-env python=3.9
      conda activate nhsn-env
    • Using venv:
      python -m venv nhsn-env
      source nhsn-env/bin/activate  # On Windows: nhsn-env\Scripts\activate
  2. Install Required Packages:

    pip install streamlit numpy matplotlib pandas datetime epiweeks plotly
  3. Clone the Repository:

    cd nhsn-streamlit
    

Running the App

streamlit run nhsn.app

Support

For Questions/Comments please email: [email protected]

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A Python app to display NHSN data (fraction reporting and weekly admission data)

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