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Upgrading to RS 0.36.2 (#156)
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* Initial commit for rs-0.36.2

* Adding tests

* Fixing read_csv options, adding tests

* Fixing linit error

* Adding read_csv schema option

* Making sep optional

* Deprecating instead of renaming
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Bidek56 authored Jan 19, 2024
1 parent b66aa2a commit 98b5987
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Showing 35 changed files with 487 additions and 381 deletions.
2 changes: 1 addition & 1 deletion .github/workflows/docs.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -14,7 +14,7 @@ jobs:
- name: Install latest Rust nightly
uses: dtolnay/rust-toolchain@stable
with:
toolchain: nightly-2023-11-15
toolchain: nightly-2023-12-23
components: rustfmt, clippy
- name: Install ghp-import
uses: actions/setup-python@v4
Expand Down
4 changes: 2 additions & 2 deletions .github/workflows/test-js.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@ jobs:
- name: Install latest Rust nightly
uses: dtolnay/rust-toolchain@stable
with:
toolchain: nightly-2023-11-15
toolchain: nightly-2023-12-23
components: rustfmt, clippy
- run: yarn --version
- name: Install Node Dependencies
Expand All @@ -43,7 +43,7 @@ jobs:
- name: Install latest Rust nightly
uses: dtolnay/rust-toolchain@stable
with:
toolchain: nightly-2023-11-15
toolchain: nightly-2023-12-23
components: rustfmt, clippy
- name: Bun version
uses: oven-sh/setup-bun@v1
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16 changes: 8 additions & 8 deletions Cargo.toml
Original file line number Diff line number Diff line change
Expand Up @@ -13,13 +13,13 @@ repository = "https://github.com/pola-rs/nodejs-polars"
crate-type = ["cdylib", "lib"]

[dependencies]
ahash = "0.8.3"
ahash = "0.8.7"
bincode = "1.3.3"
napi = {version = "2.14.1", default-features = false, features = ["napi8", "serde-json"]}
napi-derive = {version = "2.14.2", default-features = false}
polars-core = {git = "https://github.com/pola-rs/polars.git", rev = "b13afbecac039205dacbaca766ecca4bf441b347", default-features = false}
polars-io = {git = "https://github.com/pola-rs/polars.git", rev = "b13afbecac039205dacbaca766ecca4bf441b347", default-features = false}
polars-lazy = {git = "https://github.com/pola-rs/polars.git", rev = "b13afbecac039205dacbaca766ecca4bf441b347", default-features = false}
napi = {version = "2.14.2", default-features = false, features = ["napi8", "serde-json"]}
napi-derive = {version = "2.14.6", default-features = false}
polars-core = {git = "https://github.com/pola-rs/polars.git", rev = "fa59ffc1685043b44476dcb2a3f3804460ead5c5", default-features = false}
polars-io = {git = "https://github.com/pola-rs/polars.git", rev = "fa59ffc1685043b44476dcb2a3f3804460ead5c5", default-features = false}
polars-lazy = {git = "https://github.com/pola-rs/polars.git", rev = "fa59ffc1685043b44476dcb2a3f3804460ead5c5", default-features = false}
thiserror = "1"
smartstring = {version = "1"}
serde_json = {version = "1"}
Expand Down Expand Up @@ -92,7 +92,7 @@ features = [
"cov"
]
git = "https://github.com/pola-rs/polars.git"
rev = "b13afbecac039205dacbaca766ecca4bf441b347"
rev = "fa59ffc1685043b44476dcb2a3f3804460ead5c5"

[build-dependencies]
napi-build = "2.1.0"
Expand All @@ -103,4 +103,4 @@ lto = "fat"

[features]
default = ["range"]
range = ["polars-lazy/range"]
range = ["polars-lazy/range"]
2 changes: 1 addition & 1 deletion __tests__/dataframe.test.ts
Original file line number Diff line number Diff line change
Expand Up @@ -1587,7 +1587,7 @@ describe("io", () => {
},
{
name: "bar",
datatype: "Utf8",
datatype: "String",
bit_settings: "SORTED_ASC",
values: ["a"],
},
Expand Down
3 changes: 3 additions & 0 deletions __tests__/examples/datasets/data.tsv
Original file line number Diff line number Diff line change
@@ -0,0 +1,3 @@
col1 col2 col3
r1c1 r1c2 r1c3
r2c1 r2c2 r2c3
27 changes: 14 additions & 13 deletions __tests__/expr.test.ts
Original file line number Diff line number Diff line change
Expand Up @@ -856,7 +856,7 @@ describe("expr", () => {
const actual = df.select(col("a").tail(3).as("tail3"));
expect(actual).toFrameEqual(expected);
});
test("take", () => {
test.skip("take", () => {
const df = pl.DataFrame({ a: [1, 2, 2, 3, 3, 8, null, 1] });
const expected = pl.DataFrame({
"take:array": [1, 2, 3, 8],
Expand All @@ -872,10 +872,11 @@ describe("expr", () => {
});
test("gatherEvery", () => {
const df = pl.DataFrame({ a: [1, 1, 2, 2, 3, 3, 8, null, 1] });
const expected = pl.DataFrame({
everyother: [1, 2, 3, 8, 1],
});
const actual = df.select(col("a").gatherEvery(2).as("everyother"));
let expected = pl.DataFrame({ everyother: [1, 2, 3, 8, 1] });
let actual = df.select(col("a").gatherEvery(2).as("everyother"));
expect(actual).toFrameEqual(expected);
expected = pl.DataFrame({ everyother: [2, 3, 8, 1] });
actual = df.select(col("a").gatherEvery(2, 2).as("everyother"));
expect(actual).toFrameEqual(expected);
});
test("unique", () => {
Expand Down Expand Up @@ -1008,11 +1009,11 @@ describe("expr.str", () => {
expect(actual).toFrameEqual(expected);
expect(seriesActual).toFrameEqual(expected);
});
test("jsonExtract", () => {
test("jsonDecode", () => {
const df = pl.DataFrame({
json: ['{"a":1, "b": true}', null, '{"a":2, "b": false}'],
});
const actual = df.select(pl.col("json").str.jsonExtract());
const actual = df.select(pl.col("json").str.jsonDecode());
const expected = pl.DataFrame({
json: [
{ a: 1, b: true },
Expand All @@ -1024,23 +1025,23 @@ describe("expr.str", () => {
let s = pl.Series(["[1, 2, 3]", null, "[4, 5, 6]"]);
let dtype = pl.List(pl.Int64);
const expSeries = pl.Series([[1, 2, 3], null, [4, 5, 6]]);
expect(s.str.jsonExtract()).toSeriesEqual(expSeries);
expect(s.str.jsonExtract(dtype)).toSeriesEqual(expSeries);
expect(s.str.jsonDecode()).toSeriesEqual(expSeries);
expect(s.str.jsonDecode(dtype)).toSeriesEqual(expSeries);
dtype = pl.Struct([
new pl.Field("a", pl.Int64),
new pl.Field("b", pl.Bool),
]);
s = pl.Series("json", ['{"a":1, "b": true}', null, '{"a":2, "b": false}']);
expect(s.str.jsonExtract().as("json")).toSeriesEqual(
expect(s.str.jsonDecode().as("json")).toSeriesEqual(
expected.getColumn("json"),
);
expect(s.str.jsonExtract(dtype).as("json")).toSeriesEqual(
expect(s.str.jsonDecode(dtype).as("json")).toSeriesEqual(
expected.getColumn("json"),
);
s = pl.Series("col_a", [], pl.Utf8);
const exp = pl.Series("col_a", []).cast(pl.List(pl.Int64));
dtype = pl.List(pl.Int64);
expect(s.str.jsonExtract(dtype).as("col_a")).toSeriesEqual(exp);
expect(s.str.jsonDecode(dtype).as("col_a")).toSeriesEqual(exp);
});
test("jsonPathMatch", () => {
const df = pl.DataFrame({
Expand Down Expand Up @@ -1784,7 +1785,7 @@ describe("expr.dt", () => {
describe("expr metadata", () => {
test("inspect & toString", () => {
const expr = lit("foo");
const expected = "Utf8(foo)";
const expected = "String(foo)";
const actualInspect = expr[Symbol.for("nodejs.util.inspect.custom")]();
const exprString = expr.toString();
expect(actualInspect).toStrictEqual(expected);
Expand Down
6 changes: 3 additions & 3 deletions __tests__/functions.test.ts
Original file line number Diff line number Diff line change
Expand Up @@ -88,7 +88,7 @@ describe("horizontal", () => {
c: [true, true, false, true, false],
});
const actual = df.select(pl.allHorizontal([pl.col("b"), pl.col("c")]));
const expected = pl.DataFrame({ all: [false, false, false, null, false] });
const expected = pl.DataFrame({ b: [false, false, false, null, false] });
expect(actual).toFrameEqual(expected);
});
it("compute the bitwise OR horizontally across columns.", () => {
Expand All @@ -98,7 +98,7 @@ describe("horizontal", () => {
c: [true, true, false, true, false],
});
const actual = df.select(pl.anyHorizontal([pl.col("b"), pl.col("c")]));
const expected = pl.DataFrame({ any: [true, true, false, true, null] });
const expected = pl.DataFrame({ b: [true, true, false, true, null] });
expect(actual).toFrameEqual(expected);
});
it("any and all expression", () => {
Expand Down Expand Up @@ -137,7 +137,7 @@ describe("horizontal", () => {
it("sum min and max across columns", () => {
const df = pl.DataFrame({ a: [1, 2, 3], b: [1.0, 2.0, 3.0] });
const out = df.select(
pl.sumHorizontal([pl.col("a"), pl.col("b")]),
pl.sumHorizontal([pl.col("a"), pl.col("b")]).alias("sum"),
pl.maxHorizontal([pl.col("a"), pl.col("b").pow(2)]).alias("max"),
pl.minHorizontal([pl.col("a"), pl.col("b").pow(2)]).alias("min"),
);
Expand Down
26 changes: 20 additions & 6 deletions __tests__/io.test.ts
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,8 @@ import fs from "fs";
// eslint-disable-next-line no-undef
const csvpath = path.resolve(__dirname, "./examples/datasets/foods1.csv");
// eslint-disable-next-line no-undef
const tsvpath = path.resolve(__dirname, "./examples/datasets/data.tsv");
// eslint-disable-next-line no-undef
const emptycsvpath = path.resolve(__dirname, "./examples/datasets/empty.csv");
// eslint-disable-next-line no-undef
const parquetpath = path.resolve(__dirname, "./examples/foods.parquet");
Expand All @@ -21,15 +23,26 @@ describe("read:csv", () => {
const df = pl.readCSV(csvpath);
expect(df.shape).toEqual({ height: 27, width: 4 });
});

it("can read from a relative file", () => {
const df = pl.readCSV(csvpath);
expect(df.shape).toEqual({ height: 27, width: 4 });
it("can read from a csv file with inferSchemaLength = 0 option", () => {
const df = pl.readCSV(csvpath, { inferSchemaLength: 0 });
const expected = `shape: (1, 4)
┌────────────┬──────────┬────────┬──────────┐
│ category ┆ calories ┆ fats_g ┆ sugars_g │
│ --- ┆ --- ┆ --- ┆ --- │
│ str ┆ str ┆ str ┆ str │
╞════════════╪══════════╪════════╪══════════╡
│ vegetables ┆ 45 ┆ 0.5 ┆ 2 │
└────────────┴──────────┴────────┴──────────┘`;
expect(df.head(1).toString()).toEqual(expected);
});
it("can read from a csv file with options", () => {
const df = pl.readCSV(csvpath, { hasHeader: false, skipRows: 1, nRows: 4 });
expect(df.shape).toEqual({ height: 4, width: 4 });
});
it("can read from a tsv file", () => {
const df = pl.readCSV(tsvpath, { sep: "\t" });
expect(df.shape).toEqual({ height: 2, width: 3 });
});
it("can read from a csv string", () => {
const csvString = "foo,bar,baz\n1,2,3\n4,5,6\n";
const df = pl.readCSV(csvString);
Expand Down Expand Up @@ -119,7 +132,7 @@ describe("read:csv", () => {
});
test("csv files with dtypes", () => {
const df = pl.readCSV(csvpath, { dtypes: { calories: pl.Utf8 } });
expect(df.dtypes[1].equals(pl.Utf8)).toBeTruthy();
expect(df.dtypes[1].equals(pl.String)).toBeTruthy();
const df2 = pl.readCSV(csvpath);
expect(df2.dtypes[1].equals(pl.Int64)).toBeTruthy();
});
Expand All @@ -130,7 +143,7 @@ describe("read:csv", () => {
const df = pl.readCSV(csv);
expect(df.dtypes[0].equals(pl.Int64)).toBeTruthy();
const df2 = pl.readCSV(csv, { dtypes: { a: pl.Utf8 } });
expect(df2.dtypes[0].equals(pl.Utf8)).toBeTruthy();
expect(df2.dtypes[0].equals(pl.String)).toBeTruthy();
});
it.todo("can read from a stream");
});
Expand Down Expand Up @@ -380,6 +393,7 @@ describe("stream", () => {
const promise = pl.readCSVStream(readStream, {
inferSchemaLength: 2,
ignoreErrors: false,
truncateRaggedLines: false,
});
await expect(promise).rejects.toBeDefined();
});
Expand Down
20 changes: 12 additions & 8 deletions __tests__/lazy_functions.test.ts
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
import pl, { col, cols, lit } from "@polars/index";
import pl, { DataType, col, cols, lit } from "@polars/index";
import { df as _df } from "./setup";

describe("lazy functions", () => {
Expand Down Expand Up @@ -153,15 +153,15 @@ describe("lazy functions", () => {
});
test.each`
start | end | expected
${"a"} | ${"b"} | ${pl.Series("int_range", [
${"a"} | ${"b"} | ${pl.Series("a", [
[1, 2],
[2, 3],
])}
${-1} | ${"a"} | ${pl.Series("int_range", [
${-1} | ${"a"} | ${pl.Series("literal", [
[-1, 0],
[-1, 0, 1],
])}
${"b"} | ${4} | ${pl.Series("int_range", [[3], []])}
${"b"} | ${4} | ${pl.Series("b", [[3], []])}
`("$# cumMax", ({ start, end, expected }) => {
const df = pl.DataFrame({ a: [1, 2], b: [3, 4] });
const result = df.select(pl.intRanges(start, end)).toSeries();
Expand All @@ -171,20 +171,24 @@ describe("lazy functions", () => {
test("intRanges:dtype", () => {
const df = pl.DataFrame({ a: [1, 2], b: [3, 4] });
const result = df.select(pl.intRanges("a", "b"));
const expected_schema = { int_range: pl.List(pl.Int64) };
const expected_schema = { a: pl.List(pl.Int64) };
expect(result.schema).toEqual(expected_schema);
});

test("intRanges:eager", () => {
const start = pl.Series([1, 2]);
const result = pl.intRanges(start, 4, 1, true);
const expected = pl.Series("intRanges", [
const result = pl.intRanges(start, 4, 1, DataType.Int64, true);
let expected = pl.Series("intRanges", [
[1, 2, 3],
[2, 3],
]);
expect(result).toSeriesEqual(expected);
});

expected = pl.Series("intRanges", [[5, 4, 3, 2, 1]]);
expect(pl.intRanges(5, 0, -1, DataType.Int64, true)).toSeriesEqual(
expected,
);
});
test("argSortBy", () => {
const actual = _df()
.select(
Expand Down
2 changes: 1 addition & 1 deletion __tests__/lazyframe.test.ts
Original file line number Diff line number Diff line change
Expand Up @@ -1227,7 +1227,7 @@ describe("lazyframe", () => {
json: ['{"a": 1, "b": true}', null, '{"a": 2, "b": false}'],
})
.lazy()
.select(pl.col("json").str.jsonExtract())
.select(pl.col("json").str.jsonDecode())
.collectSync();
expect(actual).toFrameEqual(expected);
});
Expand Down
29 changes: 19 additions & 10 deletions __tests__/series.test.ts
Original file line number Diff line number Diff line change
Expand Up @@ -193,7 +193,7 @@ describe("series", () => {
describe("create series", () => {
it.each`
values | dtype | type
${["foo", "bar", "baz"]} | ${pl.Utf8} | ${"string"}
${["foo", "bar", "baz"]} | ${pl.String} | ${"string"}
${[1, 2, 3]} | ${pl.Float64} | ${"number"}
${[1n, 2n, 3n]} | ${pl.UInt64} | ${"bigint"}
${[true, false]} | ${pl.Bool} | ${"boolean"}
Expand All @@ -209,7 +209,7 @@ describe("series", () => {

it.each`
values | dtype
${["foo", "bar", "baz"]} | ${pl.Utf8}
${["foo", "bar", "baz"]} | ${pl.String}
${[1, 2, 3]} | ${pl.Float64}
${[1n, 2n, 3n]} | ${pl.UInt64}
`("defaults to $dtype for $input", ({ values, dtype }) => {
Expand Down Expand Up @@ -390,7 +390,7 @@ describe("series", () => {
${numSeries()} | ${"seriesEqual"} | ${[other(), true]}
${numSeries()} | ${"seriesEqual"} | ${[other(), false]}
${numSeries()} | ${"set"} | ${[boolSeries(), 2]}
${fltSeries()} | ${"setAtIdx"} | ${[[0, 1], 1]}
${fltSeries()} | ${"scatter"} | ${[[0, 1], 1]}
${numSeries()} | ${"shift"} | ${[]}
${numSeries()} | ${"shift"} | ${[1]}
${numSeries()} | ${"shiftAndFill"} | ${[1, 2]}
Expand Down Expand Up @@ -486,9 +486,10 @@ describe("series", () => {
${"isNull"} | ${pl.Series([1, null, undefined, 2]).isNull()} | ${pl.Series([false, true, true, false])}
${"isNumeric"} | ${pl.Series([1, 2, 3]).isNumeric()} | ${true}
${"isUnique"} | ${pl.Series([1, 2, 3, 1]).isUnique()} | ${pl.Series([false, true, true, false])}
${"isUtf8"} | ${pl.Series([1, 2, 3, 1]).isUtf8()} | ${false}
${"isUtf8"} | ${pl.Series([1, 2, 3, 1]).dtype.equals(pl.String)} | ${false}
${"kurtosis"} | ${pl.Series([1, 2, 3, 3, 4]).kurtosis()?.toFixed(6)} | ${"-1.044379"}
${"isUtf8"} | ${pl.Series(["foo"]).isUtf8()} | ${true}
${"isUtf8"} | ${pl.Series(["foo"]).dtype.equals(pl.String)} | ${true}
${"isString"} | ${pl.Series(["foo"]).isString()} | ${true}
${"len"} | ${pl.Series([1, 2, 3, 4, 5]).len()} | ${5}
${"limit"} | ${pl.Series([1, 2, 3, 4, 5, 5, 5]).limit(2)} | ${pl.Series([1, 2])}
${"max"} | ${pl.Series([-1, 10, 3]).max()} | ${10}
Expand Down Expand Up @@ -525,6 +526,13 @@ describe("series", () => {
${"tail"} | ${pl.Series([1, 2, 2, 1]).tail(2)} | ${pl.Series([2, 1])}
${"gatherEvery"} | ${pl.Series([1, 3, 2, 9, 1]).gatherEvery(2)} | ${pl.Series([1, 2, 1])}
${"gather"} | ${pl.Series([1, 3, 2, 9, 1]).gather([0, 1, 3])} | ${pl.Series([1, 3, 9])}
${"gather:array"} | ${pl
.Series([
[1, 2, 3],
[4, 5],
[6, 7, 8],
])
.gather([2])} | ${pl.Series([[6, 7, 8]])}
${"toArray"} | ${pl.Series([1, 2, 3]).toArray()} | ${[1, 2, 3]}
${"unique"} | ${pl.Series([1, 2, 3, 3]).unique().sort()} | ${pl.Series([1, 2, 3])}
${"cumCount"} | ${pl.Series([1, 2, 3, 3]).cumCount()} | ${pl.Series([0, 1, 2, 3])}
Expand Down Expand Up @@ -557,6 +565,7 @@ describe("series", () => {
statistic: ["sum", "null_count", "count"],
value: [false, null, null],
});

expect(actual).toFrameEqual(expected);
actual = pl.Series(["a", "b", "c", null]).describe();
expected = pl.DataFrame({
Expand All @@ -575,20 +584,20 @@ describe("series", () => {
const mask = pl.Series([true]);
expect(() => pl.Series([1, 2, 3]).set(mask, 99)).toThrow();
});
it("setAtIdx:array expected matches actual", () => {
it("scatter:array expected matches actual", () => {
const expected = pl.Series([99, 2, 99]);
const actual = pl.Series([1, 2, 3]);
actual.setAtIdx([0, 2], 99);
actual.scatter([0, 2], 99);
expect(actual).toSeriesEqual(expected);
});
it("setAtIdx:series expected matches actual", () => {
it("scatter:series expected matches actual", () => {
const expected = pl.Series([99, 2, 99]);
const indices = pl.Series([0, 2]);
const actual = pl.Series([1, 2, 3]);
actual.setAtIdx(indices, 99);
actual.scatter(indices, 99);
expect(actual).toSeriesEqual(expected);
});
it("setAtIdx: throws error", () => {
it("scatter: throws error", () => {
const mask = pl.Series([true]);
expect(() => pl.Series([1, 2, 3]).set(mask, 99)).toThrow();
});
Expand Down
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