[bug]: Encounter issue with pytest's bug

See: pytest-dev/pytest#5502
pivlab · Jul 30, 2024 · 62ec480 · 62ec480
1 parent 2945985
commit 62ec480
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/phenoplier/commands/run/correlation/pipeline.py b/phenoplier/commands/run/correlation/pipeline.py
@@ -86,8 +86,8 @@ def pipeline(
     #     logger.error(msg)
     #     exit(1)
     #
-    # logger.info("Running subroutine <correlate>...")
-    logger.error(output_dir)
+
+    logger.info("Running subroutine <correlate>...")
 
     def run_correlate(chromosome):
         suc, msg = invoke_corr_correlate(
@@ -109,7 +109,7 @@ def run_correlate(chromosome):
             exit(1)
         return suc
 
-    chromosomes = range(1, 2)
+    chromosomes = [1]
     # Use ThreadPoolExecutor for multithreading
     with concurrent.futures.ThreadPoolExecutor() as executor:
         # Start the operations and mark each future with its chromosome