Back to pull request #3596

Update numpy -> 2.0 and remove deprecated scipy #1197

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Run time

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Job	Run time
linters / linters	33s
build documentation	3m 54s
test ubuntu-20.04 python 3.9	7m 14s
test ubuntu-20.04 python 3.10	7m 11s
test ubuntu-20.04 python 3.11	6m 35s
test ubuntu-20.04 python 3.12	7m 49s
test windows-2019 python 3.9	11m 14s
test windows-2019 python 3.10	10m 20s
test windows-2019 python 3.11	12m 38s
test windows-2019 python 3.12	10m 58s
	1h 18m 26s