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Move read filtering to after merging in CRISPResso #397

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merged 4 commits into from
Mar 28, 2024

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Colelyman
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  • Move read filtering to after merging

This is in an effort to be consistent with the behavior and results of CRISPRessoPooled.

  • Properly assign the correct file names for read filtering

  • Add space around operators

Colelyman and others added 4 commits March 22, 2024 14:05
* Move read filtering to after merging

This is in an effort to be consistent with the behavior and results of
CRISPRessoPooled.

* Properly assign the correct file names for read filtering

* Add space around operators
* Run integration tests on pull_request

* Run pytest on pull_request

* Run pylint on pull_request
* Update report changes

* Switch branch of integration test repo

* Remove extraneous `crispresso_data_path`

* Point integration tests back to master
@Colelyman
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This also brings CRISPRessoReports into sync

@kclem kclem merged commit e87d92e into pinellolab:master Mar 28, 2024
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3 participants