print files in curr dir if Aggregate can't find files

pinellolab · Sep 13, 2022 · 4ed5e24 · 4ed5e24
1 parent ce25bc0
commit 4ed5e24
Showing 1 changed file with 6 additions and 0 deletions.
diff --git a/CRISPResso2/CRISPRessoAggregateCORE.py b/CRISPResso2/CRISPRessoAggregateCORE.py
@@ -842,6 +842,12 @@ def main():
                                                        quilt_plots_to_show)
                 crispresso2_info['running_info']['report_location'] = report_filename
                 crispresso2_info['running_info']['report_filename'] = os.path.basename(report_filename)
+        else: #no files successfully imported
+            files_in_curr_dir = os.listdir('.')
+            if len(files_in_curr_dir) > 15:
+                files_in_curr_dir = files_in_curr_dir[0:15]
+                files_in_curr_dir.append("(Complete listing truncated)")
+            info('No CRISPResso runs could be imported.\nFiles in current directory:\n\t' + "\n\t".join(files_in_curr_dir))
 
         end_time = datetime.now()
         end_time_string = end_time.strftime('%Y-%m-%d %H:%M:%S')