https://github.com/pallets/markupsafe/issues/284

phenopolis · Feb 28, 2022 · d4cb3f3 · d4cb3f3
1 parent 00699a6
commit d4cb3f3
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diff --git a/requirements.txt b/requirements.txt
@@ -20,3 +20,4 @@ boto3>=1.16.43
 pytest-cov>=2.10,<2.11
 black==19.10b0
 flake8>=3.8,<3.9
+markupsafe<=2.0.1
diff --git a/tests/test_variants.py b/tests/test_variants.py
@@ -42,6 +42,7 @@ def test_variant_genotype_vcf(_admin_client):
 def test_cyvcf2_S3(_admin_client):
     from cyvcf2 import VCF
 
+    # a valid AWS_ACCESS_KEY_ID / AWS_SECRET_ACCESS_KEY is needed here
     vcf_S3 = VCF("s3://3kricegenome/test/test.vcf.gz")  # public VCF file
     assert len(vcf_S3.raw_header) == 559362, "Critical, S3 access not working"