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An upcoming upgrade of the nf-validation plugin from 1.1.3 to 2.0.0 will make breaking changes (nextflow-io/plugins#66). Right now, this pipeline uses the latest version of nf-validation and so will stop functioning when this upgrade occurs.
Solution
Pin Nextflow plugin versions
These should be pinned to specific versions (i.e., change to [email protected] and [email protected]). Pinning nf-iridanext since we might as well pin all plugin versions in this fix.
Issue
An upcoming upgrade of the
nf-validation
plugin from 1.1.3 to 2.0.0 will make breaking changes (nextflow-io/plugins#66). Right now, this pipeline uses the latest version of nf-validation and so will stop functioning when this upgrade occurs.Solution
These should be pinned to specific versions (i.e., change to
[email protected]
and[email protected]
). Pinning nf-iridanext since we might as well pin all plugin versions in this fix.snvphylnfc/nextflow.config
Lines 166 to 170 in 0ac17cb
Update version to indicate a bug fix to
2.0.1
:snvphylnfc/nextflow.config
Line 211 in 0ac17cb
CHANGELOG.md
to list the change. https://github.com/phac-nml/snvphylnfc/blob/dev/CHANGELOG.mdThe text was updated successfully, but these errors were encountered: