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1. ab_opt ab_opt Public

   Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.

   Python 52 10

2. protein-sequence-diffusion-model protein-sequence-diffusion-model Public

   diffusion model for protein sequence generation

   Jupyter Notebook 45 5

3. Awesome-Computational-Structural-Biology Awesome-Computational-Structural-Biology Public

   A curated list of awesome self-learning materials in Computational Structural Biology, such as sources, tutorials, etc.

   35

4. spatial-temporal-transformer spatial-temporal-transformer Public

   traffic flow prediction

   Jupyter Notebook 22 5

5. ab_rmsd ab_rmsd Public

   Calculate the RMSD between two antibody structure (including nanobody and antibody).

   Python 8 4

6. lucidrains/denoising-diffusion-pytorch lucidrains/denoising-diffusion-pytorch Public

   Implementation of Denoising Diffusion Probabilistic Model in Pytorch

   Python 8.4k 1k