Skip to content

Fix synthax

Fix synthax #2

Workflow file for this run

url: https://www.open-systems-pharmacology.org/OSPSuite.ReportingEngine/
template:
bootstrap: 5
development:
mode: release
reference:
- title: "Working with Workflow objects"
desc: "Functions and classes for creating and working with Workflow objects"
contents:
- has_concept("workflows")
- has_concept("workflow helpers")
- matches("createWorkflowFromExcelInput")
- title: "Simulation Sets and Outputs"
desc: "Classes required for creating workflows"
contents:
- matches("SimulationSet")
- matches("PopulationSimulationSet")
- matches("Output")
- matches("DataSource")
- matches("PkParameterInfo")
- matches("loadStudyDesign")
- title: "Workflow tasks"
desc: "Functions and classes for creating and working with workflow tasks"
contents:
- has_concept("workflow tasks")
- matches("SensitivityPlotSettings")
- matches("saveTaskResults")
- title: "Qualification Workflows"
desc: "Functions and classes dedicated to Qualification Workflows"
contents:
- has_concept("qualification workflow")
- matches("QualificationVersionInfo")
- title: "Writing and formatting reports"
desc: "Functions for facilitating the writing and formatting of markdown and word reports"
contents:
- has_concept("reporting")
- title: "Enum Helpers"
desc: "Enums listing available values for specific properties"
contents:
- has_concept("enum helpers")
- title: "Default Settings"
desc: "Functions for defining default package or workflow settings."
contents:
- starts_with("setDefault")
- matches("setWatermarkConfiguration")
- starts_with("getDefault")
- matches("setPlotFormat")
- title: "Simulated and observed data helpers"
desc: "Helper functions for working with simulated and observed data."
contents:
- matches("calculateArithmeticErrorRange")
- matches("calculateGeometricErrorRange")
- matches("calculateGMFE")
- matches("calculateResiduals")
- matches("displayConfigurationPlanPlotInfo")
- matches("getResiduals")
- matches("isBetween")
- matches("measureValuesBetween")
- matches("geomean")
- matches("geomeanDividedBySD")
- matches("geomeanMultipliedBySD")
- matches("getStatisticsFromType")
- matches("readObservedDataFile")
- matches("lastPathElement")
- matches("evalDataFilter")
- matches("getSelectedRows")
- matches("getSelectedData")
- matches("loadSimulationWithUpdatedPaths")
- matches("loadWorkflowPopulation")
- matches("getMolWeightForCompound")
- matches("plotAbsorptionTimeProfile")
- matches("plotDemographyHistogram")
- matches("plotDemographyRange")
- matches("plotMassBalanceCumulativeTimeProfile")
- matches("plotMassBalancePieChart")
- matches("plotMassBalanceTimeProfile")
- matches("plotMeanObsVsPred")
- matches("plotMeanResVsPred")
- matches("plotMeanResVsTime")
- matches("plotMeanTimeProfile")
- matches("plotPopTimeProfile")
- matches("plotPopTimeProfileLog")
- matches("plotResidualsHistogram")
- matches("plotResidualsQQPlot")
- matches("ratioBoxplot")
- matches("vpcParameterPlot")
- matches("addLineBreakToCaption")
- matches("AggregationConfiguration")
- matches("prettyCaption")
- matches("removeForbiddenLetters")
- matches("trimFileName")
- title: "Parallel computation helpers"
desc: "Helper functions for working with parallel simulations and sensitivity analyses."
contents:
- matches("analyzeCoreSensitivity")
- matches("analyzeSensitivity")
- matches("checkLibraryLoaded")
- matches("checkPopulationLoaded")
- matches("checkSimulationLoaded")
- matches("defaultQuantileVec")
- matches("defaultSensitivityAnalysisNumberOfCores")
- matches("defaultSimulationNumberOfCores")
- matches("defaultVariationRange")
- matches("generateResultFileNames")
- matches("simulateModelOnCore")
- matches("updateSimulationIndividualParameters")
- title: "Logging system"
desc: "Helper functions for working with workflow logs."
contents:
- matches("LogTypes")
- matches("logInfo")
- matches("logError")
- matches("logDebug")
- matches("logCatch")
- matches("saveLogs")
- matches("saveLogsToJson")
- matches("showLogMessages")
- matches("displayDebugLogs")
- matches("getReportingEngineInfo")