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@pbradleylab

Bradley Lab

Our long-term aim is to understand the gut microbiome as well as we currently understand model microbes.

Popular repositories Loading

  1. rnaseq-quantification-pipeline rnaseq-quantification-pipeline Public

    Developmental private RNASeq pipeline for bacterial quantification.

    Python

  2. phylogenize phylogenize Public

    A tool for phylogenetic comparison and analysis of microbe including gene's environmental association

    HTML

  3. PanSweep PanSweep Public

    R

  4. Updated_PanSweep_Figure_Code Updated_PanSweep_Figure_Code Public

    R

  5. cirrhosis-pansweep cirrhosis-pansweep Public

    Pipelines and analyses for use with PanSweep

    R

  6. split_homology split_homology Public

    Repository for pipeline in "Human xenobiotic metabolism proteins have full-length and split homologs in the gut microbiome."

    Python

Repositories

Showing 6 of 6 repositories
  • phylogenize Public

    A tool for phylogenetic comparison and analysis of microbe including gene's environmental association

    pbradleylab/phylogenize’s past year of commit activity
    HTML 0 0 2 1 Updated Dec 18, 2024
  • split_homology Public

    Repository for pipeline in "Human xenobiotic metabolism proteins have full-length and split homologs in the gut microbiome."

    pbradleylab/split_homology’s past year of commit activity
    Python 0 0 0 0 Updated Nov 5, 2024
  • cirrhosis-pansweep Public

    Pipelines and analyses for use with PanSweep

    pbradleylab/cirrhosis-pansweep’s past year of commit activity
    R 0 0 0 0 Updated Oct 9, 2024
  • PanSweep Public
    pbradleylab/PanSweep’s past year of commit activity
    R 0 MIT 0 2 1 Updated Oct 9, 2024
  • pbradleylab/Updated_PanSweep_Figure_Code’s past year of commit activity
    R 0 0 0 0 Updated Oct 7, 2024
  • rnaseq-quantification-pipeline Public

    Developmental private RNASeq pipeline for bacterial quantification.

    pbradleylab/rnaseq-quantification-pipeline’s past year of commit activity
    Python 0 MIT 0 6 (2 issues need help) 0 Updated Jan 25, 2024

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