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DOC: Development on Gitpod have problems #59459

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serl opened this issue Aug 9, 2024 · 4 comments · May be fixed by #60451
Open
1 task done

DOC: Development on Gitpod have problems #59459

serl opened this issue Aug 9, 2024 · 4 comments · May be fixed by #60451
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Build Library building on various platforms Docs

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@serl
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serl commented Aug 9, 2024

Pandas version checks

  • I have checked that the issue still exists on the latest versions of the docs on main here

Location of the documentation

https://pandas.pydata.org/docs/dev/development/contributing_gitpod.html

Documentation problem

Aiming for a quick-start, I wanted to use GitPod to setup my environment.

After a couple of minor hiccups I try to tackle in #59456, I stepped on a more serious roadblock:

$ python -m pytest pandas

+ /usr/local/bin/ninja
[1/1] Generating write_version_file with a custom command
ImportError while loading conftest '/workspace/pandas/pandas/conftest.py'.
pandas/conftest.py:715: in <module>
    idx = Index(pd.array([f"pandas_{i}" for i in range(10)], dtype="string[pyarrow]"))
pandas/core/construction.py:321: in array
    return cls._from_sequence(data, dtype=dtype, copy=copy)
pandas/core/arrays/string_arrow.py:203: in _from_sequence
    return cls(pa.array(result, type=pa.large_string(), from_pandas=True))
pyarrow/array.pxi:281: in pyarrow.lib.array
    ???
pyarrow/array.pxi:4519: in pyarrow.lib.get_values
    ???
pyarrow/pandas-shim.pxi:228: in pyarrow.lib._PandasAPIShim.is_series
    ???
pyarrow/pandas-shim.pxi:124: in pyarrow.lib._PandasAPIShim._have_pandas_internal
    ???
pyarrow/pandas-shim.pxi:103: in pyarrow.lib._PandasAPIShim._check_import
    ???
pyarrow/pandas-shim.pxi:106: in pyarrow.lib._PandasAPIShim._check_import
    ???
pyarrow/pandas-shim.pxi:74: in pyarrow.lib._PandasAPIShim._import_pandas
    ???
E   UserWarning: pyarrow requires pandas 1.0.0 or above, pandas 0+untagged.1.gd5bbd97 is installed. Therefore, pandas-specific integration is not used.

This comes from a fresh workspace built on main, and it is confirmed by pandas.__version__:

$ python
Python 3.10.8 (main, Dec  6 2022, 14:13:21) [GCC 10.2.1 20210110] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import pandas
+ /usr/local/bin/ninja
[1/1] Generating write_version_file with a custom command
>>> pandas.__version__
'0+untagged.1.gd5bbd97'

Note that in the initialization steps, pandas 2.2.0.dev0... got built (output below).

Output from the initialization task in .gitpod.yml 
$  HISTFILE=/workspace/.gitpod/cmd-0 history -r; {
> mkdir -p .vscode
> cp gitpod/settings.json .vscode/settings.json
> git fetch --tags
> python -m pip install -ve . --no-build-isolation --config-settings editable-verbose=true
> pre-commit install --install-hooks
> 
> } && {
> python -m pip install -ve . --no-build-isolation --config-settings editable-verbose=true
> echo "✨ Pre-build complete! You can close this terminal ✨ "
> 
> }
Using pip 24.2 from /usr/local/lib/python3.10/site-packages/pip (python 3.10)
Defaulting to user installation because normal site-packages is not writeable
Obtaining file:///workspace/pandas
  Running command Checking if build backend supports build_editable
  Checking if build backend supports build_editable ... done
  Running command Preparing editable metadata (pyproject.toml)
  + meson setup /workspace/pandas /workspace/pandas/build/cp310 -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --vsenv --native-file=/workspace/pandas/build/cp310/meson-python-native-file.ini
  The Meson build system
  Version: 1.2.1
  Source dir: /workspace/pandas
  Build dir: /workspace/pandas/build/cp310
  Build type: native build
  Project name: pandas
  Project version: 0+untagged.1.gd5bbd97
  C compiler for the host machine: cc (gcc 10.2.1 "cc (Debian 10.2.1-6) 10.2.1 20210110")
  C linker for the host machine: cc ld.bfd 2.35.2
  C++ compiler for the host machine: c++ (gcc 10.2.1 "c++ (Debian 10.2.1-6) 10.2.1 20210110")
  C++ linker for the host machine: c++ ld.bfd 2.35.2
  Cython compiler for the host machine: cython (cython 3.0.11)
  Host machine cpu family: x86_64
  Host machine cpu: x86_64
  Program python found: YES (/usr/local/bin/python)
  Found pkg-config: /usr/bin/pkg-config (0.29.2)
  Run-time dependency python found: YES 3.10
  Build targets in project: 54

  pandas 0+untagged.1.gd5bbd97

    User defined options
      Native files: /workspace/pandas/build/cp310/meson-python-native-file.ini
      buildtype   : release
      vsenv       : True
      b_ndebug    : if-release
      b_vscrt     : md

  Found ninja-1.11.1.git.kitware.jobserver-1 at /usr/local/bin/ninja

  Visual Studio environment is needed to run Ninja. It is recommended to use Meson wrapper:
  /usr/local/bin/meson compile -C .
  + /usr/local/bin/ninja
  [1/152] Generating pandas/_libs/algos_common_helper_pxi with a custom command
  [2/152] Generating pandas/_libs/khash_primitive_helper_pxi with a custom command
  [3/152] Generating pandas/_libs/index_class_helper_pxi with a custom command
  [4/152] Generating pandas/_libs/algos_take_helper_pxi with a custom command
  [5/152] Generating pandas/_libs/hashtable_class_helper_pxi with a custom command
  [6/152] Generating pandas/__init__.py with a custom command
  [7/152] Generating pandas/_libs/hashtable_func_helper_pxi with a custom command
  [8/152] Generating pandas/_libs/intervaltree_helper_pxi with a custom command
  [9/152] Generating pandas/_libs/sparse_op_helper_pxi with a custom command
  [10/152] Generating write_version_file with a custom command
  [11/152] Compiling C object pandas/_libs/tslibs/parsing.cpython-310-x86_64-linux-gnu.so.p/.._src_parser_tokenizer.c.o
  [12/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/base.pyx
  [13/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/ccalendar.pyx
  [14/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/dtypes.pyx
  [15/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/nattype.pyx
  [16/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/np_datetime.pyx
  [17/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/vectorized.pyx
  [18/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/timezones.pyx
  [19/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/tzconversion.pyx
  [20/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/fields.pyx
  [21/152] Compiling C object pandas/_libs/tslibs/base.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_base.pyx.c.o
  [22/152] Linking target pandas/_libs/tslibs/base.cpython-310-x86_64-linux-gnu.so
  [23/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/strptime.pyx
  [24/152] Compiling Cython source /workspace/pandas/pandas/_libs/arrays.pyx
  [25/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/conversion.pyx
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  [27/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/timestamps.pyx
  [28/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/timedeltas.pyx
  [29/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/offsets.pyx
  [30/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslibs/period.pyx
  [31/152] Compiling C object pandas/_libs/tslibs/ccalendar.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_ccalendar.pyx.c.o
  [32/152] Linking target pandas/_libs/tslibs/ccalendar.cpython-310-x86_64-linux-gnu.so
  [33/152] Compiling Cython source /workspace/pandas/pandas/_libs/hashing.pyx
  [34/152] Compiling C object pandas/_libs/arrays.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_arrays.pyx.c.o
  [35/152] Linking target pandas/_libs/arrays.cpython-310-x86_64-linux-gnu.so
  [36/152] Compiling C object pandas/_libs/tslibs/np_datetime.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_np_datetime.pyx.c.o
  [37/152] Linking target pandas/_libs/tslibs/np_datetime.cpython-310-x86_64-linux-gnu.so
  [38/152] Compiling C object pandas/_libs/tslibs/dtypes.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_dtypes.pyx.c.o
  [39/152] Linking target pandas/_libs/tslibs/dtypes.cpython-310-x86_64-linux-gnu.so
  [40/152] Compiling C object pandas/_libs/tslibs/vectorized.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_vectorized.pyx.c.o
  [41/152] Linking target pandas/_libs/tslibs/vectorized.cpython-310-x86_64-linux-gnu.so
  [42/152] Compiling C object pandas/_libs/tslibs/nattype.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_nattype.pyx.c.o
  [43/152] Linking target pandas/_libs/tslibs/nattype.cpython-310-x86_64-linux-gnu.so
  [44/152] Compiling Cython source /workspace/pandas/pandas/_libs/indexing.pyx
  [45/152] Compiling C object pandas/_libs/tslibs/timezones.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_timezones.pyx.c.o
  [46/152] Linking target pandas/_libs/tslibs/timezones.cpython-310-x86_64-linux-gnu.so
  [47/152] Compiling Cython source /workspace/pandas/pandas/_libs/algos.pyx
  [48/152] Compiling C object pandas/_libs/indexing.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_indexing.pyx.c.o
  [49/152] Linking target pandas/_libs/indexing.cpython-310-x86_64-linux-gnu.so
  [50/152] Compiling C object pandas/_libs/tslibs/conversion.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_conversion.pyx.c.o
  [51/152] Linking target pandas/_libs/tslibs/conversion.cpython-310-x86_64-linux-gnu.so
  [52/152] Compiling Cython source /workspace/pandas/pandas/_libs/index.pyx
  [53/152] Compiling Cython source /workspace/pandas/pandas/_libs/internals.pyx
  [54/152] Compiling C object pandas/_libs/hashing.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_hashing.pyx.c.o
  [55/152] Linking target pandas/_libs/hashing.cpython-310-x86_64-linux-gnu.so
  [56/152] Compiling C object pandas/_libs/tslibs/fields.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_fields.pyx.c.o
  [57/152] Linking target pandas/_libs/tslibs/fields.cpython-310-x86_64-linux-gnu.so
  [58/152] Compiling C object pandas/_libs/lib.cpython-310-x86_64-linux-gnu.so.p/src_parser_tokenizer.c.o
  [59/152] Compiling C object pandas/_libs/tslibs/tzconversion.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_tzconversion.pyx.c.o
  [60/152] Linking target pandas/_libs/tslibs/tzconversion.cpython-310-x86_64-linux-gnu.so
  [61/152] Compiling C object pandas/_libs/pandas_datetime.cpython-310-x86_64-linux-gnu.so.p/src_vendored_numpy_datetime_np_datetime.c.o
  [62/152] Compiling C object pandas/_libs/pandas_datetime.cpython-310-x86_64-linux-gnu.so.p/src_datetime_date_conversions.c.o
  [63/152] Compiling C object pandas/_libs/pandas_datetime.cpython-310-x86_64-linux-gnu.so.p/src_datetime_pd_datetime.c.o
  [64/152] Compiling C object pandas/_libs/pandas_datetime.cpython-310-x86_64-linux-gnu.so.p/src_vendored_numpy_datetime_np_datetime_strings.c.o
  [65/152] Compiling Cython source /workspace/pandas/pandas/_libs/groupby.pyx
  [66/152] Compiling C object pandas/_libs/pandas_parser.cpython-310-x86_64-linux-gnu.so.p/src_parser_io.c.o
  [67/152] Linking target pandas/_libs/pandas_datetime.cpython-310-x86_64-linux-gnu.so
  [68/152] Compiling C object pandas/_libs/pandas_parser.cpython-310-x86_64-linux-gnu.so.p/src_parser_pd_parser.c.o
  [69/152] Compiling C object pandas/_libs/pandas_parser.cpython-310-x86_64-linux-gnu.so.p/src_parser_tokenizer.c.o
  [70/152] Linking target pandas/_libs/pandas_parser.cpython-310-x86_64-linux-gnu.so
  [71/152] Compiling C object pandas/_libs/parsers.cpython-310-x86_64-linux-gnu.so.p/src_parser_io.c.o
  [72/152] Compiling Cython source /workspace/pandas/pandas/_libs/missing.pyx
  [73/152] Compiling C object pandas/_libs/parsers.cpython-310-x86_64-linux-gnu.so.p/src_parser_tokenizer.c.o
  [74/152] Compiling C object pandas/_libs/json.cpython-310-x86_64-linux-gnu.so.p/src_vendored_ujson_python_ujson.c.o
  [75/152] Compiling C object pandas/_libs/json.cpython-310-x86_64-linux-gnu.so.p/src_vendored_ujson_python_JSONtoObj.c.o
  [76/152] Compiling C object pandas/_libs/json.cpython-310-x86_64-linux-gnu.so.p/src_vendored_ujson_python_objToJSON.c.o
  [77/152] Compiling C object pandas/_libs/json.cpython-310-x86_64-linux-gnu.so.p/src_vendored_ujson_lib_ultrajsonenc.c.o
  [78/152] Compiling C object pandas/_libs/json.cpython-310-x86_64-linux-gnu.so.p/src_vendored_ujson_lib_ultrajsondec.c.o
  [79/152] Linking target pandas/_libs/json.cpython-310-x86_64-linux-gnu.so
  [80/152] Compiling Cython source /workspace/pandas/pandas/_libs/interval.pyx
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  [82/152] Compiling C object pandas/_libs/tslibs/strptime.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_strptime.pyx.c.o
  [83/152] Linking target pandas/_libs/tslibs/strptime.cpython-310-x86_64-linux-gnu.so
  [84/152] Compiling Cython source /workspace/pandas/pandas/_libs/parsers.pyx
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  [88/152] Linking target pandas/_libs/tslibs/parsing.cpython-310-x86_64-linux-gnu.so
  [89/152] Compiling Cython source /workspace/pandas/pandas/_libs/join.pyx
  [90/152] Compiling Cython source /workspace/pandas/pandas/_libs/properties.pyx
  [91/152] Compiling Cython source /workspace/pandas/pandas/_libs/ops.pyx
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  [94/152] Compiling C object pandas/_libs/tslibs/period.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_period.pyx.c.o
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  [96/152] Compiling C object pandas/_libs/properties.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_properties.pyx.c.o
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  [98/152] Linking target pandas/_libs/properties.cpython-310-x86_64-linux-gnu.so
  [99/152] Compiling Cython source /workspace/pandas/pandas/_libs/byteswap.pyx
  [100/152] Compiling Cython source /workspace/pandas/pandas/_libs/sas.pyx
  [101/152] Compiling C object pandas/_libs/missing.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_missing.pyx.c.o
  [102/152] Compiling C object pandas/_libs/byteswap.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_byteswap.pyx.c.o
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  [104/152] Linking target pandas/_libs/byteswap.cpython-310-x86_64-linux-gnu.so
  [105/152] Compiling Cython source /workspace/pandas/pandas/_libs/testing.pyx
  [106/152] Compiling C object pandas/_libs/tslibs/timestamps.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_timestamps.pyx.c.o
  [107/152] Linking target pandas/_libs/tslibs/timestamps.cpython-310-x86_64-linux-gnu.so
  [108/152] Compiling C object pandas/_libs/internals.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_internals.pyx.c.o
  [109/152] Linking target pandas/_libs/internals.cpython-310-x86_64-linux-gnu.so
  [110/152] Compiling Cython source /workspace/pandas/pandas/_libs/tslib.pyx
  [111/152] Compiling C object pandas/_libs/tslibs/timedeltas.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_timedeltas.pyx.c.o
  [112/152] Linking target pandas/_libs/tslibs/timedeltas.cpython-310-x86_64-linux-gnu.so
  [113/152] Compiling Cython source /workspace/pandas/pandas/_libs/sparse.pyx
  [114/152] Compiling C object pandas/_libs/ops.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_ops.pyx.c.o
  [115/152] Compiling Cython source /workspace/pandas/pandas/_libs/writers.pyx
  [116/152] Linking target pandas/_libs/ops.cpython-310-x86_64-linux-gnu.so
  [117/152] Compiling Cython source /workspace/pandas/pandas/_libs/window/indexers.pyx
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  [119/152] Linking target pandas/_libs/testing.cpython-310-x86_64-linux-gnu.so
  [120/152] Compiling Cython source /workspace/pandas/pandas/_libs/window/aggregations.pyx
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  [125/152] Compiling C object pandas/_libs/window/indexers.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_window_indexers.pyx.c.o
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  [133/152] Compiling C++ object pandas/_libs/window/aggregations.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_window_aggregations.pyx.cpp.o
  [134/152] Linking target pandas/_libs/window/aggregations.cpython-310-x86_64-linux-gnu.so
  [135/152] Compiling C object pandas/_libs/index.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_index.pyx.c.o
  [136/152] Linking target pandas/_libs/index.cpython-310-x86_64-linux-gnu.so
  [137/152] Compiling C object pandas/_libs/tslibs/offsets.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_tslibs_offsets.pyx.c.o
  [138/152] Linking target pandas/_libs/tslibs/offsets.cpython-310-x86_64-linux-gnu.so
  [139/152] Compiling C object pandas/_libs/lib.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_lib.pyx.c.o
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  [141/152] Compiling C object pandas/_libs/sparse.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_sparse.pyx.c.o
  [142/152] Linking target pandas/_libs/sparse.cpython-310-x86_64-linux-gnu.so
  [143/152] Compiling C object pandas/_libs/interval.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_interval.pyx.c.o
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  [147/152] Compiling C object pandas/_libs/algos.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_algos.pyx.c.o
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  [149/152] Compiling C object pandas/_libs/groupby.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_groupby.pyx.c.o
  [150/152] Linking target pandas/_libs/groupby.cpython-310-x86_64-linux-gnu.so
  [151/152] Compiling C object pandas/_libs/hashtable.cpython-310-x86_64-linux-gnu.so.p/meson-generated_pandas__libs_hashtable.pyx.c.o
  [152/152] Linking target pandas/_libs/hashtable.cpython-310-x86_64-linux-gnu.so
  Preparing editable metadata (pyproject.toml) ... done
Requirement already satisfied: numpy>=1.23.5 in /usr/local/lib/python3.10/site-packages (from pandas==0+untagged.1.gd5bbd97) (1.26.4)
Requirement already satisfied: python-dateutil>=2.8.2 in /usr/local/lib/python3.10/site-packages (from pandas==0+untagged.1.gd5bbd97) (2.9.0.post0)
Requirement already satisfied: pytz>=2020.1 in /usr/local/lib/python3.10/site-packages (from pandas==0+untagged.1.gd5bbd97) (2024.1)
Requirement already satisfied: tzdata>=2022.7 in /usr/local/lib/python3.10/site-packages (from pandas==0+untagged.1.gd5bbd97) (2024.1)
Requirement already satisfied: six>=1.5 in /usr/local/lib/python3.10/site-packages (from python-dateutil>=2.8.2->pandas==0+untagged.1.gd5bbd97) (1.16.0)
Building wheels for collected packages: pandas
  Running command Building editable for pandas (pyproject.toml)
  Building editable for pandas (pyproject.toml) ... done
  Created wheel for pandas: filename=pandas-0+untagged.1.gd5bbd97-cp310-cp310-linux_x86_64.whl size=33543 sha256=79eb7f15ae85d6c0e578a26bf5b074cb095a89e3875b24dfebe9d646c9483d49
  Stored in directory: /tmp/pip-ephem-wheel-cache-8vso3s_8/wheels/39/77/57/1c321003879eca324f847754963bcb179286b0b84b53b1dde9
Successfully built pandas
Installing collected packages: pandas
ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
fastparquet 2024.5.0 requires pandas>=1.5.0, but you have pandas 0+untagged.1.gd5bbd97 which is incompatible.
pyreadstat 1.2.7 requires pandas>=1.2.0, but you have pandas 0+untagged.1.gd5bbd97 which is incompatible.
seaborn 0.13.2 requires pandas>=1.2, but you have pandas 0+untagged.1.gd5bbd97 which is incompatible.
xarray 2024.7.0 requires pandas>=2.0, but you have pandas 0+untagged.1.gd5bbd97 which is incompatible.
Successfully installed pandas-0+untagged.1.gd5bbd97
pre-commit installed at .git/hooks/pre-commit
Using pip 24.2 from /usr/local/lib/python3.10/site-packages/pip (python 3.10)
Defaulting to user installation because normal site-packages is not writeable
Obtaining file:///workspace/pandas
  Running command Checking if build backend supports build_editable
  Checking if build backend supports build_editable ... done
  Running command Preparing editable metadata (pyproject.toml)
  + meson setup --reconfigure /workspace/pandas /workspace/pandas/build/cp310 -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --vsenv --native-file=/workspace/pandas/build/cp310/meson-python-native-file.ini
  Cleaning... 0 files.
  The Meson build system
  Version: 1.2.1
  Source dir: /workspace/pandas
  Build dir: /workspace/pandas/build/cp310
  Build type: native build
  Project name: pandas
  Project version: 2.2.0.dev0+2274.gd5bbd97345
  C compiler for the host machine: cc (gcc 10.2.1 "cc (Debian 10.2.1-6) 10.2.1 20210110")
  C linker for the host machine: cc ld.bfd 2.35.2
  C++ compiler for the host machine: c++ (gcc 10.2.1 "c++ (Debian 10.2.1-6) 10.2.1 20210110")
  C++ linker for the host machine: c++ ld.bfd 2.35.2
  Cython compiler for the host machine: cython (cython 3.0.11)
  Host machine cpu family: x86_64
  Host machine cpu: x86_64
  Program python found: YES (/usr/local/bin/python)
  Build targets in project: 54

  pandas 2.2.0.dev0+2274.gd5bbd97345

    User defined options
      Native files: /workspace/pandas/build/cp310/meson-python-native-file.ini
      buildtype   : release
      vsenv       : True
      b_ndebug    : if-release
      b_vscrt     : md

  Found ninja-1.11.1.git.kitware.jobserver-1 at /usr/local/bin/ninja

  Visual Studio environment is needed to run Ninja. It is recommended to use Meson wrapper:
  /usr/local/bin/meson compile -C .
  + /usr/local/bin/ninja
  [1/1] Generating write_version_file with a custom command
  Preparing editable metadata (pyproject.toml) ... done
Requirement already satisfied: numpy>=1.23.5 in /usr/local/lib/python3.10/site-packages (from pandas==2.2.0.dev0+2274.gd5bbd97345) (1.26.4)
Requirement already satisfied: python-dateutil>=2.8.2 in /usr/local/lib/python3.10/site-packages (from pandas==2.2.0.dev0+2274.gd5bbd97345) (2.9.0.post0)
Requirement already satisfied: pytz>=2020.1 in /usr/local/lib/python3.10/site-packages (from pandas==2.2.0.dev0+2274.gd5bbd97345) (2024.1)
Requirement already satisfied: tzdata>=2022.7 in /usr/local/lib/python3.10/site-packages (from pandas==2.2.0.dev0+2274.gd5bbd97345) (2024.1)
Requirement already satisfied: six>=1.5 in /usr/local/lib/python3.10/site-packages (from python-dateutil>=2.8.2->pandas==2.2.0.dev0+2274.gd5bbd97345) (1.16.0)
Building wheels for collected packages: pandas
  Running command Building editable for pandas (pyproject.toml)
  Building editable for pandas (pyproject.toml) ... done
  Created wheel for pandas: filename=pandas-2.2.0.dev0+2274.gd5bbd97345-cp310-cp310-linux_x86_64.whl size=33657 sha256=daf4cb77e643e000d8a22b50e7d228127e739772ec5c687040f2a9fee9b0b81b
  Stored in directory: /tmp/pip-ephem-wheel-cache-va_pbd3a/wheels/39/77/57/1c321003879eca324f847754963bcb179286b0b84b53b1dde9
Successfully built pandas
Installing collected packages: pandas
  Attempting uninstall: pandas
    Found existing installation: pandas 0+untagged.1.gd5bbd97
    Uninstalling pandas-0+untagged.1.gd5bbd97:
      Removing file or directory /home/gitpod/.local/lib/python3.10/site-packages/
      Successfully uninstalled pandas-0+untagged.1.gd5bbd97
Successfully installed pandas-2.2.0.dev0+2274.gd5bbd97345
✨ Pre-build complete! You can close this terminal ✨

Reading around, seems like it could be a shallow clone/missing tags problem, but git fetch --unshallow happily reports that the repo is indeed not shallow, and git tag reports a lot of tags:

$ git fetch --unshallow 
fatal: --unshallow on a complete repository does not make sense

$ git tag | wc -l
157

Suggested fix for documentation

By digging a bit, I feel that the Gitpod files has been touched after the documentation has been written, and the screenshots/information are not really up-to-date.
Also, after #54046 I think that most of the gitpod directory is now unused and might be deleted(?)

I'm willing to help with the housekeeping if you have any advices... And if you have ideas on how to make pytest run, I'm interested!
@serl serl added Docs Needs Triage Issue that has not been reviewed by a pandas team member labels Aug 9, 2024
@serl serl changed the title DOC: Development on GitPod have problems DOC: Development on Gitpod have problems Aug 9, 2024
@serl
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serl commented Aug 9, 2024

Related to #55214 (but not really a duplicate as I've different problems here)

@serl serl mentioned this issue Aug 10, 2024
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@rhshadrach rhshadrach added Build Library building on various platforms and removed Needs Triage Issue that has not been reviewed by a pandas team member labels Aug 11, 2024
@serl serl mentioned this issue Aug 13, 2024
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serl commented Aug 26, 2024

Still investigating on this thing.
Something that seems to help is to delete the file build/cp310/_version_meson.py.

That's because if that file exist it is taken as-is:

pandas/generate_version.py

Lines 17 to 24 in 3ba3cd0

try:
import _version_meson
version = _version_meson.__version__
git_version = _version_meson.__git_version__
except ImportError:
version = versioneer.get_version()
git_version = versioneer.get_versions()["full-revisionid"]

Given how unusable is anything with version starting with 0+ (I mean we cannot even run a single test), what about discarding the cache and always call versioneer if it's the case?
We could probably throw some more explicit error, it should be easy to have something clearer than "pyarrow requires pandas 1.0.0 or above" 😁

(That said, I'd really like to understand how 0+blabla ends there sometimes in gitpod)

@micheleuap
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micheleuap commented Nov 27, 2024 •
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I was having the same issue running the devcontainer myself (i.e. not in gitpod)

I thought this was a consequence of this documented issue with versioneer - then it turned out to just be me not having followed the forking instructions correctly...

brendanm2025 added a commit to brendanm2025/pandas-eecs481 that referenced this issue Nov 30, 2024
@brendanm2025
Issue pandas-dev#59459 Patch - removing faulty _version_meson.py file
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@brendanm2025 brendanm2025 linked a pull request Nov 30, 2024 that will close this issue
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Here's a basic patch that deletes the buggy _version_meson.py file, as mentioned by serl.

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