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Fix: calculate Cooks distances with few samples #44

Merged
merged 4 commits into from
Jan 13, 2023
Merged

Fix: calculate Cooks distances with few samples #44

merged 4 commits into from
Jan 13, 2023

Commits on Jan 12, 2023

  1. fix: change default axis in trimmedVariance from sample-wise to gene-… 

    …wise
    @BorisMuzellec
    BorisMuzellec committed Jan 12, 2023
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  2. docs: update docstring

    @BorisMuzellec
    BorisMuzellec committed Jan 12, 2023
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  3. ci: add test to check that pydeseq2 runs error-free with small (n_sam… 

    …ples <= 2) cohorts
    @BorisMuzellec
    BorisMuzellec committed Jan 12, 2023
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Commits on Jan 13, 2023

  1. refactor: set "refit_cooks=True" explicitly in "test_few_samples"

    @BorisMuzellec
    BorisMuzellec committed Jan 13, 2023
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