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    12 repositories

    • iges-app

      Public
      A simple web app to allow audience member to suggest and vote on words for a word cloud
      Jupyter Notebook
      •0•0•0•0•Updated Oct 24, 2024Oct 24, 2024

    • samasy

      Public
      A SAmple MAnagement SYstem for robotic transfer of samples in 96 well plates
      96-well-platedna-sample-transferbiomekdna-sample-interface
      Ruby
      •
      Other
      •2•3•1•2•Updated Aug 23, 2024Aug 23, 2024

    • orchid

      Public
      A novel management, annotation, and machine learning framework for analyzing cancer mutations
      machine-learningbioinformaticscancer-genomicsvariant-annotations
      Jupyter Notebook
      •
      Other
      •8•31•4•0•Updated Jul 4, 2024Jul 4, 2024

    • sTRAP_SNP_TF_Data

      Public
      Scripts & Data for Predicting Transcription Factor Binding Sites Modulated by Single Nucleotide Polymorphisms
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Oct 5, 2020Oct 5, 2020

    • pancancer_pleiotropy

      Public
      Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.
      3•15•1•0•Updated Jul 15, 2020Jul 15, 2020

    • cfdna-panel-publication

      Public
      Supporting material for the manuscript titled: "A machine learning approach to optimizing cell-free DNA sequencing panels: with an application to prostate cancer"
      Jupyter Notebook
      •
      MIT License
      •0•3•0•0•Updated Jul 13, 2020Jul 13, 2020

    • PrCa_TWAS

      Public
      Scripts and Data for PrCa TWAS Project
      R
      •
      GNU General Public License v3.0
      •3•2•0•0•Updated Jul 6, 2019Jul 6, 2019

    • example_cluster_job

      Public
      Example SGE Job (see README.txt)
      Ruby
      •0•0•0•0•Updated Jan 14, 2016Jan 14, 2016

    • gauss

      Public
      GAUSS procedures
      GAP
      •0•0•0•0•Updated Jan 13, 2015Jan 13, 2015

    • glimmix

      Public
      Multilevel Modeling in Epidemiology with GLIMMIX
      SAS
      •0•1•0•0•Updated Jan 13, 2015Jan 13, 2015

    • hm-gwa

      Public
      Software for Hierarchical Modeling of Genome-wide Association Studies
      R
      •0•0•0•0•Updated Jan 13, 2015Jan 13, 2015

    • episoft

      Public
      episoft
      0•1•0•0•Updated Jan 13, 2015Jan 13, 2015