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    4 repositories

    • snakemake_bsaseq

      Public
      A Snakemake pipeline to perform BSA-seq to identify causal the recessive mutation(s) underlying a mutant phenotype
      Python
      •
      Apache License 2.0
      •0•1•0•0•Updated Apr 6, 2023Apr 6, 2023

    • pacbio_snakemake

      Public
      A Snakemake pipeline to go from raw .subreads.bam PacBio Iso-Seq to assembled mRNA isoforms (FASTA format)
      pacbioiso-seqlong-read-sequencingpacbio-iso-seqmrna-seqworkflowpipeline
      Python
      •
      MIT License
      •0•1•0•0•Updated Jul 29, 2022Jul 29, 2022

    • gwas

      Public archive
      R-based pipeline/script to implement a Genome-Wide Association Study (GWAS) analysis based on the RAINBOWR package
      rrainbowrgwassnpsvcf
      R
      •
      Apache License 2.0
      •1•5•0•0•Updated Nov 18, 2021Nov 18, 2021

    • Manduca

      Public
      This repository includes the files on the Manduca sexta hexenal isomerase gene experiments
      R
      •0•0•1•0•Updated Jun 10, 2020Jun 10, 2020