GenSpectrum

All

19 repositories

LAPIS
Public
An API, a query engine, and a database schema for genomic sequences; currently with a focus on SARS-CoV-2
research genomics epidemiology covid-19 sars-cov-2
Kotlin
•
GNU Affero General Public License v3.0
•7•22•45•3•Updated Jan 6, 2025Jan 6, 2025
dashboards
Public
TypeScript
•0•3•59•9•Updated Jan 6, 2025Jan 6, 2025
LAPIS-SILO
Public
Sequence Indexing engine for Large Order of genomic data
C++
•
GNU Affero General Public License v3.0
•3•13•97•7•Updated Jan 6, 2025Jan 6, 2025
dashboard-components
Public
TypeScript
•
GNU Affero General Public License v3.0
•0•2•57•10•Updated Jan 6, 2025Jan 6, 2025
ingest
Public
Kotlin
•0•1•0•0•Updated Jan 6, 2025Jan 6, 2025
LAPIS-SILO-e2e
Public
TypeScript
•1•1•9•1•Updated Jan 6, 2025Jan 6, 2025
cov-spectrum-website
Public
A web platform to detect and analyze variants of SARS-CoV-2
research genomics epidemiology covid-19 sars-cov-2 cov-spectrum
TypeScript
•
GNU General Public License v3.0
•14•61•75•8•Updated Dec 30, 2024Dec 30, 2024
genspectrum-homepage
Public archive
HTML
•0•1•0•0•Updated Dec 21, 2024Dec 21, 2024
.github
Public
0•0•0•0•Updated Nov 21, 2024Nov 21, 2024
nextclade-datasets
Public
0•0•0•2•Updated Nov 4, 2024Nov 4, 2024
firewall
Public
Rust
•1•0•0•0•Updated Oct 28, 2024Oct 28, 2024
loculus-config
Public
Shell
•0•0•0•0•Updated Sep 20, 2024Sep 20, 2024
lapisR
Public
R
•0•2•1•0•Updated Apr 4, 2024Apr 4, 2024
cov-spectrum-server
Public
The server part of CoV-Spectrum
cov-spectrum
Kotlin
•
GNU General Public License v3.0
•3•5•1•3•Updated Jul 18, 2023Jul 18, 2023
genspectrum-chat-conversations
Public
0•0•0•0•Updated Jun 19, 2023Jun 19, 2023
discussions
Public
0•0•0•0•Updated Apr 9, 2023Apr 9, 2023
cov-spectrum-ppretty
Public
R
•
GNU General Public License v3.0
•0•1•10•0•Updated Dec 17, 2022Dec 17, 2022
mpox-spectrum-website
Public archive
TypeScript
•1•4•8•0•Updated Dec 17, 2022Dec 17, 2022
cov-spectrum-docs
Public archive
cov-spectrum
1•2•0•0•Updated Nov 3, 2021Nov 3, 2021