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[Platform]: variant page widgets init #380

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May 28, 2024
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@gjmcn gjmcn commented May 28, 2024

Pull Request Template (PR Tittle)

Should match thease format: [Scoped application (Genetics || Platform || Package || AppConfig)]: Short description mentioning the affected page and/or section component

Description

Please include a summary of the change and which issue is fixed. List any dependencies that are required for this change.

Issue: # (link)
Deploy preview: (link)

Type of change

Please delete options that are not relevant.

  • Bug fix (non-breaking change which fixes an issue)
  • New feature (non-breaking change which adds functionality)
  • Breaking change (fix or feature that would cause existing functionality to not work as expected)
  • This change requires a documentation update

How Has This Been Tested?

Please describe the tests that you ran to verify your changes. Provide instructions so we can reproduce.

  • Test A
  • Test B

Checklist:

  • I have commented my code, particularly in hard-to-understand areas
  • I have made corresponding changes to the documentation
  • My changes generate no new warnings
  • Any dependent changes have been merged and published in downstream modules

@gjmcn gjmcn changed the title Gm variant widgets [Platform]: variant page widgets init May 28, 2024
@gjmcn gjmcn merged commit eed3ac4 into ot-variant-page May 28, 2024
11 checks passed
@gjmcn gjmcn deleted the gm-variant-widgets branch May 29, 2024 08:37
carcruz added a commit that referenced this pull request Jul 22, 2024
* [Platform] Add Profile and ProfileHeader to variant page (#376)

* [Platform]: variant page widgets init (#380)

* draft pharmacokinetics widget (#383)

* move reported protein link to description (#381)

* [Platform] Add GWAS credible sets widget to variant page (#390)

* [Platform] Add QTL credible sets widget to variant page (#396)

* [Platform] Add Uniprot id to Uniprot description link (#401)

* [Platform] Add allele frequency plot to variant page metadata section (#403)

* frequency vis examples

* polish plots

* allele frequency bars

* use flex for allele frequency plot

* do not import grid

* [Platform] Clean up variant page sections and summaries (#404)

* [Platform] Update variant page QTL credible sets widget (#406)

* [Platform] Use API for variant page header (#412)

* [Platform] Correct dbXref link in variant page header (#414)

* [Platform] Fix clinvar dbXref (#417)

* [Platform] Use API for metadata in variant page (#420)
carcruz added a commit that referenced this pull request Jul 29, 2024
* [Platform] Add Profile and ProfileHeader to variant page (#376)

* [Platform]: variant page widgets init (#380)

* draft pharmacokinetics widget (#383)

* move reported protein link to description (#381)

* [Platform] Add GWAS credible sets widget to variant page (#390)

* [Platform] Add QTL credible sets widget to variant page (#396)

* [Platform] Add Uniprot id to Uniprot description link (#401)

* [Platform] Add allele frequency plot to variant page metadata section (#403)

* [Platform] Clean up variant page sections and summaries (#404)

* [Platform] Update variant page QTL credible sets widget (#406)

* [Platform] Use API for variant page header (#412)

* [Platform] Correct dbXref link in variant page header (#414)

* [Platform] Fix clinvar dbXref (#417)

* [Platform] Use API for metadata in variant page (#420)

* [Platform] Use API data for in silico predictors widget on variant page (#424)


Co-authored-by: Carlos Cruz <[email protected]>

* [Platform] Minor improvements to variant page insilico predictors widget (#429)

* [Platform] Add VEP widget to variant page (#428)
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4 participants