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Use generated_files in Apply Measure Now which is what the workflow g…
…em does cf NREL/OpenStudio#4046 and https://github.com/NREL/OpenStudio-workflow-gem/blob/e569f910be364d33c3ddb1a655570c85f1b24bfa/lib/openstudio/workflow/jobs/run_initialization.rb#L99
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