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build(deps-dev): bump sqlalchemy from 1.4.45 to 2.0.24 #2393

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build(deps-dev): bump sqlalchemy from 1.4.45 to 2.0.24

build(deps-dev): bump sqlalchemy from 1.4.45 to 2.0.24 #2393

Workflow file for this run

.github/workflows/test_runner.yaml at e0e43fd
name: Tests
on: [push]
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
jobs:
check:
name: Check formatting
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v4
with:
python-version: "3.8"
- name: Install deps
run: |
# ensure requirements .txt files are timestamped later than .in
# files so we don't re-compile them
touch requirements.*.txt
make devenv
- name: Run all pre-commit checks
run: |
source ${{ github.workspace }}/venv/bin/activate
pre-commit run --all-files
test:
name: Run test suite
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v4
with:
python-version: "3.8"
- name: Install deps
run: |
# ensure requirements .txt files are timestamped later than .in
# files so we don't re-compile them
touch requirements.*.txt
make devenv
- name: Start SQL Server and Trino instances for the tests
run: docker-compose up -d mssql trino
- name: Run tests
run: |
source ${{ github.workspace }}/venv/bin/activate
PYTHONPATH=. pytest -vvv tests/
docker-tests:
name: Test docker build
runs-on: ubuntu-20.04
steps:
- uses: actions/checkout@v4
- name: Build docker
run: make docker-build ENV=dev
- name: Basic docker test
run: docker-compose run --rm -v $PWD:/workspace dev cohortextractor
- name: Run unit tests in docker
run: docker-compose run --rm -v $PWD:/workspace dev pytest
build:
name: Test we can build PyPI package
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v4
with:
python-version: "3.8"
- name: Install wheel package
run: pip install wheel
- name: Build package
run: python setup.py sdist bdist_wheel