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Relocate task_info to _viash [WIP]
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KaiWaldrant committed Jul 8, 2024
1 parent 7eeb2f7 commit 793c05e
Showing 1 changed file with 30 additions and 1 deletion.
31 changes: 30 additions & 1 deletion _viash.yaml
Original file line number Diff line number Diff line change
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viash_version: 0.9.0-RC6

# Step 1: Change the name of the task.
# example: task_name_of_this_task
name: task_template
organization: openproblems-bio
version: dev
# Step 2: Update the description to a short description of the task.
description: |
An OpenProblems benchmark task.
license: MIT
# Step 3: Add keywords to describe the task.
keywords: [single-cell, openproblems, benchmark]
# Step 4: Update the `task_template` to the name of the task from step 1.
links:
issue_tracker: https://github.com/openproblems-bio/task_template/issues
repository: https://github.com/openproblems-bio/task_template
docker_registry: ghcr.io
info:
summary:
motivation:
label:
image:

test_resources:
- type: s3
path: s3://openproblems-data/resources_test/task_template
Expand All @@ -19,7 +30,25 @@ info:
path: s3://openproblems-data/resources_test/common/
dest: resources_test/common

version: dev
# Step 5: Update te authors of the task.
authors:
# Full name of the author, usually in the name of FirstName MiddleName LastName.
- name: ...
# Role of the author. Possible values:
#
# * `"author"`: Authors who have made substantial contributions to the component.
# * `"maintainer"`: The maintainer of the component.
# * `"contributor"`: Authors who have made smaller contributions (such as code patches etc.).
roles: [ ... ]
# Additional information on the author
info:
github: ...
orcid: ...
email: ...
twitter: ...
linkedin: ...



config_mods: |
.runners[.type == "nextflow"].config.labels := { lowmem : "memory = 20.Gb", midmem : "memory = 50.Gb", highmem : "memory = 100.Gb", lowcpu : "cpus = 5", midcpu : "cpus = 15", highcpu : "cpus = 30", lowtime : "time = 1.h", midtime : "time = 4.h", hightime : "time = 8.h", veryhightime : "time = 24.h" }

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