bug in scgpt fixed #225
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| # name: Build | |
| # on: | |
| # push: | |
| # branches: [ 'main' ] | |
| # workflow_dispatch: | |
| # inputs: | |
| # version: | |
| # description: | | |
| # The version of the project to build. Example: `1.0.3`. | |
| # If not provided, a development build with a version name | |
| # based on the branch name will be built. Otherwise, a release | |
| # build with the provided version will be built. | |
| # required: false | |
| # jobs: | |
| # build: | |
| # uses: openproblems-bio/actions/.github/workflows/build.yml@main | |
| # with: | |
| # version: ${{ github.event.inputs.version }} | |
| name: build | |
| on: | |
| push: | |
| branches: [ 'main' ] | |
| workflow_dispatch: | |
| inputs: | |
| target_branch: | |
| description: 'Branch to deploy to. If not specified, `build-${BRANCH_NAME}` will be used.' | |
| required: false | |
| version: | |
| description: 'Version name to use for the build. If not specified, `build-${BRANCH_NAME}` will be used.' | |
| required: false | |
| jobs: | |
| # phase 1 | |
| list: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| target_branch: ${{ steps.defaults.outputs.target_branch }} | |
| version: ${{ steps.defaults.outputs.version }} | |
| component_matrix: ${{ steps.set_matrix.outputs.matrix }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: viash-io/viash-actions/setup@v6 | |
| - name: Determine version tag from branch name | |
| id: defaults | |
| run: | | |
| BRANCH_NAME=$(echo $GITHUB_REF | sed 's/refs\/heads\///') | |
| VERSION=${{ github.event.inputs.version }} | |
| if [ -z "$VERSION" ]; then | |
| VERSION="build-$BRANCH_NAME" | |
| fi | |
| echo "version=$VERSION" >> $GITHUB_OUTPUT | |
| TARGET_BRANCH=${{ github.event.inputs.target_branch }} | |
| if [ -z "$TARGET_BRANCH" ]; then | |
| TARGET_BRANCH="build/$BRANCH_NAME" | |
| fi | |
| echo "target_branch=$TARGET_BRANCH" >> $GITHUB_OUTPUT | |
| - name: Remove target folder from .gitignore | |
| run: | | |
| # allow publishing the target folder | |
| sed -i '/^target.*/d' .gitignore | |
| - uses: viash-io/viash-actions/ns-build@v6 | |
| with: | |
| config_mod: .functionality.version := '${{ steps.defaults.outputs.version }}' | |
| parallel: true | |
| - name: Deploy to target branch | |
| uses: peaceiris/actions-gh-pages@v4 | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| publish_dir: . | |
| publish_branch: ${{ steps.defaults.outputs.target_branch }} | |
| - id: ns_list | |
| uses: viash-io/viash-actions/ns-list@v6 | |
| with: | |
| platform: docker | |
| src: src | |
| format: json | |
| - id: set_matrix | |
| run: | | |
| echo "matrix=$(jq -c '[ .[] | | |
| { | |
| "name": (.functionality.namespace + "/" + .functionality.name), | |
| "dir": .info.config | capture("^(?<dir>.*\/)").dir | |
| } | |
| ]' ${{ steps.ns_list.outputs.output_file }} )" >> $GITHUB_OUTPUT | |
| # phase 2 | |
| build: | |
| needs: list | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: read | |
| packages: write | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| component: ${{ fromJson(needs.list.outputs.component_matrix) }} | |
| steps: | |
| # Remove unnecessary files to free up space. Otherwise, we get 'no space left on device.' | |
| - uses: data-intuitive/reclaim-the-bytes@v2 | |
| - uses: actions/checkout@v4 | |
| - uses: viash-io/viash-actions/setup@v6 | |
| - name: Build container | |
| uses: viash-io/viash-actions/ns-build@v6 | |
| with: | |
| config_mod: .functionality.version := '${{ needs.list.outputs.version }}' | |
| platform: docker | |
| src: ${{ matrix.component.dir }} | |
| setup: build | |
| - name: Login to container registry | |
| uses: docker/login-action@v3 | |
| with: | |
| registry: ghcr.io | |
| username: ${{ github.actor }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Push container | |
| uses: viash-io/viash-actions/ns-build@v6 | |
| with: | |
| config_mod: .functionality.version := '${{ needs.list.outputs.version }}' | |
| platform: docker | |
| src: ${{ matrix.component.dir }} | |
| setup: push |