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openproblems-bio / task_batch_integration Public

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Test

remove template metric #8

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remove template metric #8

Summary
Jobs
- List components to test
  
  Test (process_dataset, data_processors, src/data_processors/process_dataset/config.vsh.yaml, src/...
  
  Test (fastmnn, methods, src/methods/fastmnn/config.vsh.yaml, src/methods/fastmnn/, r_script, meth...
  
  Test (bbknn, methods, src/methods/bbknn/config.vsh.yaml, src/methods/bbknn/, python_script, metho...
  
  Test (scvi, methods, src/methods/scvi/config.vsh.yaml, src/methods/scvi/, python_script, methods/...
  
  Test (scalex, methods, src/methods/scalex/config.vsh.yaml, src/methods/scalex/, python_script, me...
  
  Test (mnnpy, methods, src/methods/mnnpy/config.vsh.yaml, src/methods/mnnpy/, python_script, metho...
  
  Test (combat, methods, src/methods/combat/config.vsh.yaml, src/methods/combat/, python_script, me...
  
  Test (mnn_correct, methods, src/methods/mnn_correct/config.vsh.yaml, src/methods/mnn_correct/, r_...
  
  Test (scanorama, methods, src/methods/scanorama/config.vsh.yaml, src/methods/scanorama/, python_s...
  
  Test (liger, methods, src/methods/liger/config.vsh.yaml, src/methods/liger/, r_script, methods/li...
  
  Test (pyliger, methods, src/methods/pyliger/config.vsh.yaml, src/methods/pyliger/, python_script,...
  
  Test (scanvi, methods, src/methods/scanvi/config.vsh.yaml, src/methods/scanvi/, python_script, me...
  
  Test (transform, transformers, src/transformers/transform/config.vsh.yaml, src/transformers/trans...
  
  Test (shuffle_integration, control_methods, src/control_methods/shuffle_integration/config.vsh.ya...
  
  Test (embed_by_cell_type, control_methods, src/control_methods/embed_cell_types/config.vsh.yaml, ...
  
  Test (batch_embed, control_methods, src/control_methods/no_integration_batch/config.vsh.yaml, src...
  
  Test (no_integration, control_methods, src/control_methods/no_integration/config.vsh.yaml, src/co...
  
  Test (shuffle_integration_by_cell_type, control_methods, src/control_methods/shuffle_integration_...
  
  Test (shuffle_integration_by_batch, control_methods, src/control_methods/shuffle_integration_by_b...
  
  Test (embed_cell_types_jittered, control_methods, src/control_methods/embed_cell_types_jittered/c...
Run details
- Usage
- Workflow file

Usage Workflow file

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remove template metric #8

test / Test (process_dataset, data_processors, src/data_processors/process_dataset/config.vsh.yaml, src/...

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