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[batch_int] fastmnn_feature fail
batch_integration
relates to task batch_integration
bug
Something isn't working
Make it easy / document how to run just one component of New feature or request
wontfix
This will not be worked on
viash test
enhancement
#118
opened Apr 14, 2023 by
scottgigante-immunai
Document non-docker usage
documentation
Improvements or additions to documentation
#144
opened May 19, 2023 by
scottgigante-immunai
[label_projection] seurat_transfer method out of date
bug
Something isn't working
#207
opened Jul 20, 2023 by
KaiWaldrant
update scot in multimodal data integration task
dependencies
Pull requests that update a dependency file
#209
opened Jul 27, 2023 by
KaiWaldrant
[bat_int] Lisi indices file not found on nf-tower
batch_integration
relates to task batch_integration
bug
Something isn't working
Port cell cell communication task from OpenProblemsv1 to OpenProblemsv2
enhancement
New feature or request
help wanted
Extra attention is needed
#241
opened Oct 4, 2023 by
rcannood
7 tasks
Align
label_projection
task with openpipelines-bio/openpipelines/src/labels_transfer
#67
opened Jan 18, 2023 by
rcannood
4 tasks
Add treatment condition to dataset pipeline
enhancement
New feature or request
#252
opened Oct 7, 2023 by
rcannood
[batch_int] Revamp control methods
enhancement
New feature or request
#285
opened Nov 16, 2023 by
rcannood
Adding more data from Cell Census for batch integration
enhancement
New feature or request
#286
opened Nov 22, 2023 by
mumichae
Revising open problem task structure
documentation
Improvements or additions to documentation
enhancement
New feature or request
#292
opened Nov 29, 2023 by
mumichae
update New feature or request
run_and_check_adata.py
test
enhancement
#296
opened Nov 30, 2023 by
KaiWaldrant
[bat_int] cell cycle genes not in adata for cellxgene_census dataset
batch_integration
relates to task batch_integration
bug
Something isn't working
#331
opened Jan 8, 2024 by
KaiWaldrant
[cellxgene] human_retina_cell_atlas dataset cannot be normalized
bug
Something isn't working
cellxgene_census
Relates to cellxgene_census dataset
dataset_loader
Relates to a dataset_loader
#358
opened Feb 5, 2024 by
KaiWaldrant
[bat_int] hcla dataset cannot be processed
batch_integration
relates to task batch_integration
bug
Something isn't working
cellxgene_census
Relates to cellxgene_census dataset
#359
opened Feb 5, 2024 by
KaiWaldrant
Adding Seurat's RPCA method to Benchmarking tasks?
enhancement
New feature or request
#452
opened May 23, 2024 by
andrewdchen
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Updated in the last three days: updated:>2025-01-02.