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Issues list

[batch_int] fastmnn_feature fail batch_integration relates to task batch_integration bug Something isn't working
#270 opened Oct 18, 2023 by KaiWaldrant v2 (migration)
Make it easy / document how to run just one component of viash test enhancement New feature or request wontfix This will not be worked on
#118 opened Apr 14, 2023 by scottgigante-immunai
adata.X is None in resources_test documentation Improvements or additions to documentation
#120 opened Apr 14, 2023 by scottgigante-immunai v2.1
Document non-docker usage documentation Improvements or additions to documentation
#144 opened May 19, 2023 by scottgigante-immunai
Check whether name or label is unique enhancement New feature or request
#153 opened May 26, 2023 by KaiWaldrant future-work
[label_projection] seurat_transfer method out of date bug Something isn't working
#207 opened Jul 20, 2023 by KaiWaldrant
update scot in multimodal data integration task dependencies Pull requests that update a dependency file
#209 opened Jul 27, 2023 by KaiWaldrant
[bat_int] Lisi indices file not found on nf-tower batch_integration relates to task batch_integration bug Something isn't working
#237 opened Sep 28, 2023 by KaiWaldrant future-work
Port cell cell communication task from OpenProblemsv1 to OpenProblemsv2 enhancement New feature or request help wanted Extra attention is needed
#241 opened Oct 4, 2023 by rcannood
7 tasks
main_build CI fails bug Something isn't working viash
#245 opened Oct 5, 2023 by KaiWaldrant
Add treatment condition to dataset pipeline enhancement New feature or request
#252 opened Oct 7, 2023 by rcannood
[batch_int] Revamp control methods enhancement New feature or request
#285 opened Nov 16, 2023 by rcannood
Revising open problem task structure documentation Improvements or additions to documentation enhancement New feature or request
#292 opened Nov 29, 2023 by mumichae
update run_and_check_adata.py test enhancement New feature or request
#296 opened Nov 30, 2023 by KaiWaldrant
methods benchmark out of storage bug Something isn't working
#330 opened Jan 8, 2024 by KaiWaldrant
[bat_int] cell cycle genes not in adata for cellxgene_census dataset batch_integration relates to task batch_integration bug Something isn't working
#331 opened Jan 8, 2024 by KaiWaldrant
[cellxgene] human_retina_cell_atlas dataset cannot be normalized bug Something isn't working cellxgene_census Relates to cellxgene_census dataset dataset_loader Relates to a dataset_loader
#358 opened Feb 5, 2024 by KaiWaldrant
[bat_int] hcla dataset cannot be processed batch_integration relates to task batch_integration bug Something isn't working cellxgene_census Relates to cellxgene_census dataset
#359 opened Feb 5, 2024 by KaiWaldrant
Adding Seurat's RPCA method to Benchmarking tasks? enhancement New feature or request
#452 opened May 23, 2024 by andrewdchen
ProTip! Updated in the last three days: updated:>2025-01-02.