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Add model location to workflow #3648

Add model location to workflow

Add model location to workflow #3648

Workflow file for this run

name: viash test
on:
pull_request:
push:
branches: [ '**' ]
jobs:
run_ci_check_job:
runs-on: ubuntu-latest
outputs:
run_ci: ${{ steps.github_cli.outputs.check }}
steps:
- name: 'Check if branch has an existing pull request and the trigger was a push'
id: github_cli
run: |
pull_request=$(gh pr list -R ${{ github.repository }} -H ${{ github.ref_name }} --json url --state open --limit 1 | jq '.[0].url')
# If the branch has a PR and this run was triggered by a push event, do not run
if [[ "$pull_request" != "null" && "$GITHUB_REF_NAME" != "main" && "${{ github.event_name == 'push' }}" == "true" && "${{ !contains(github.event.head_commit.message, 'ci force') }}" == "true" ]]; then
echo "check=false" >> $GITHUB_OUTPUT
else
echo "check=true" >> $GITHUB_OUTPUT
fi
env:
GITHUB_TOKEN: ${{ secrets.GTHB_PAT }}
# phase 1
list:
needs: run_ci_check_job
env:
s3_bucket: s3://openproblems-data/resources_test/
runs-on: ubuntu-latest
if: "needs.run_ci_check_job.outputs.run_ci == 'true'"
outputs:
matrix: ${{ steps.set_matrix.outputs.matrix }}
cache_key: ${{ steps.cache.outputs.cache_key }}
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- uses: viash-io/viash-actions/setup@v5
- uses: viash-io/viash-actions/project/sync-and-cache-s3@v5
id: cache
with:
s3_bucket: $s3_bucket
dest_path: resources_test
cache_key_prefix: resources_test__
- id: ns_list
uses: viash-io/viash-actions/ns-list@v5
with:
platform: docker
format: json
- id: ns_list_filtered
uses: viash-io/viash-actions/project/detect-changed-components@v5
with:
input_file: "${{ steps.ns_list.outputs.output_file }}"
- id: set_matrix
run: |
echo "matrix=$(jq -c '[ .[] |
{
"name": (.functionality.namespace + "/" + .functionality.name),
"config": .info.config
}
]' ${{ steps.ns_list_filtered.outputs.output_file }} )" >> $GITHUB_OUTPUT
# phase 2
viash_test:
needs: list
if: ${{ needs.list.outputs.matrix != '[]' && needs.list.outputs.matrix != '' }}
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
component: ${{ fromJson(needs.list.outputs.matrix) }}
steps:
# Remove unnecessary files to free up space. Otherwise, we get 'no space left on device.'
- uses: data-intuitive/reclaim-the-bytes@v2
- uses: actions/checkout@v4
- uses: viash-io/viash-actions/setup@v5
# use cache
- name: Cache resources data
uses: actions/cache@v4
timeout-minutes: 10
with:
path: resources_test
key: ${{ needs.list.outputs.cache_key }}
- name: Run test
timeout-minutes: 30
run: |
VIASH_TEMP=$RUNNER_TEMP/viash viash test \
"${{ matrix.component.config }}" \
--cpus 2 \
--memory "5gb"