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[PRE REVIEW]: MOTrainer: Distributed Measurement Operator Trainer for Data Assimilation Applications #6351

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editorialbot opened this issue Feb 13, 2024 · 29 comments
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Jupyter Notebook pre-review Python TeX Track: 5 (DSAIS) Data Science, Artificial Intelligence, and Machine Learning waitlisted Submissions in the JOSS backlog due to reduced service mode.

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editorialbot commented Feb 13, 2024

Submitting author: @rogerkuou (Ou Ku)
Repository: https://github.com/VegeWaterDynamics/motrainer
Branch with paper.md (empty if default branch):
Version: v0.1.3
Editor: @srmnitc
Reviewers: @abhishektiwari, @KwickSilver
Managing EiC: Kristen Thyng

Status

status

Status badge code:

HTML: <a href="https://joss.theoj.org/papers/0ec1cefe66e3d09476dad0fe3b918c35"><img src="https://joss.theoj.org/papers/0ec1cefe66e3d09476dad0fe3b918c35/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/0ec1cefe66e3d09476dad0fe3b918c35/status.svg)](https://joss.theoj.org/papers/0ec1cefe66e3d09476dad0fe3b918c35)

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Thanks for submitting your paper to JOSS @rogerkuou. Currently, there isn't a JOSS editor assigned to your paper.

@rogerkuou if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.

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The JOSS submission bot @editorialbot is here to help you find and assign reviewers and start the main review. To find out what @editorialbot can do for you type:

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@editorialbot editorialbot added pre-review Track: 6 (ESE) Earth Sciences and Ecology labels Feb 13, 2024
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Hello human, I'm @editorialbot, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

@editorialbot commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

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Software report:

github.com/AlDanial/cloc v 1.88  T=0.06 s (802.0 files/s, 129411.1 lines/s)
--------------------------------------------------------------------------------
Language                      files          blank        comment           code
--------------------------------------------------------------------------------
Python                           12            241            331            904
Markdown                         12            179              0            445
Jupyter Notebook                  6              0           4309            298
YAML                              6             17              7            156
TOML                              1             16              6            128
TeX                               1              7              0             76
Bourne Shell                      1             10              5             48
JSON                              4              0              0             47
Bourne Again Shell                1              5              4             11
HTML                              1              2              0              9
--------------------------------------------------------------------------------
SUM:                             45            477           4662           2122
--------------------------------------------------------------------------------


gitinspector failed to run statistical information for the repository

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Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.1109/JSTARS.2014.2325780 is OK
- 10.1080/02723646.2016.1236606 is OK
- 10.5334/jors.148 is OK

MISSING DOIs

- 10.25080/majora-7b98e3ed-013 may be a valid DOI for title: Dask: Parallel Computation with Blocked algorithms and Task Scheduling

INVALID DOIs

- https://doi.org/10.1016/j.rse.2022.113116 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/j.rse.2015.09.009 is INVALID because of 'https://doi.org/' prefix

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Wordcount for paper.md is 555

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👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

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Five most similar historical JOSS papers:

ADaPT-ML: A Data Programming Template for Machine Learning
Submitting author: @nulberry
Handling editor: @jmschrei (Active)
Reviewers: @aaronpeikert, @wincowgerDEV
Similarity score: 0.8103

uDALES: large-eddy-simulation software for urban flow, dispersion, and microclimate modelling
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OpenOA: An Open-Source Codebase For Operational Analysis of Wind Farms
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⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.

@editorialbot editorialbot added Track: 5 (DSAIS) Data Science, Artificial Intelligence, and Machine Learning and removed Track: 6 (ESE) Earth Sciences and Ecology labels Feb 19, 2024
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arfon commented Feb 19, 2024

@editorialbot query scope

@rogerkuou – due to the relatively small size of this code, the editors will now discuss if it meets the substantial scholarly effort criterion for review by JOSS. We should get back to you sometime next week. If you want to fix the DOIs (noting that @editorialbot's suggestions are not always right), you can, then use the following commands (one at a time, as the first line of a new comment) to regenerate the PDF and check the references.

@editorialbot generate pdf
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Submission flagged for editorial review.

@editorialbot editorialbot added the query-scope Submissions of uncertain scope for JOSS label Feb 19, 2024
@arfon arfon removed the query-scope Submissions of uncertain scope for JOSS label Mar 16, 2024
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arfon commented Mar 16, 2024

@rogerkuou - thanks for your submission to JOSS. This submission has passed an initial scope review. We're currently managing a large backlog of submissions and the editor most appropriate for your area is already rather busy.

For now, we will need to waitlist this paper and process it as the queue reduces. Thanks for your patience!

@arfon arfon added the waitlisted Submissions in the JOSS backlog due to reduced service mode. label Mar 16, 2024
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arfon commented Mar 24, 2024

@editorialbot invite @srmnitc as editor

👋 @srmnitc – would you be willing to edit this submission for JOSS? It feels somewhat close(ish!) to 'research data management'.

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Invitation to edit this submission sent!

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srmnitc commented Mar 26, 2024

@arfon It is slightly of my expertise, but I think I can manage to edit this.

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srmnitc commented Mar 26, 2024

@editorialbot assign me as editor

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Assigned! @srmnitc is now the editor

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srmnitc commented Mar 26, 2024

@rogerkuou I will be the handling editor for this submission. The next step would be to find some reviewers for the submission. Unfortunately, I am on holidays from tomorrow, but I will be back next week.

Meanwhile, feel free to ask me any questions here. Any suggestions that you might have for reviewers is also welcome!

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rogerkuou commented Mar 26, 2024

Hi @srmnitc, Thanks a lot! And also thanks @arfon for the scope-review!

For now, I do not have any questions. If there turns out to be anything unclear for the tests or documentation, just let me know.

And @srmnitc hope you enjoy the holiday! Have a good one.

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srmnitc commented Apr 5, 2024

👋 @nulberry @d-eggert @KwickSilver @abhishektiwari , would any of you be willing to review this submission for JOSS? As you know, we carry out our checklist-driven reviews here in GitHub issues and follow these guidelines. Thanks!

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@srmnitc sure. Looks interesting paper. Add me as reviewer.

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srmnitc commented Apr 5, 2024

@editorialbot add @abhishektiwari as reviewer

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@abhishektiwari added to the reviewers list!

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KwickSilver commented Apr 5, 2024 via email

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srmnitc commented Apr 5, 2024

@editorialbot add @KwickSilver as reviewer

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@KwickSilver added to the reviewers list!

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srmnitc commented Apr 5, 2024

@rogerkuou We have two reviewers already, but I will give a bit more time for the others to respond, and then we will get started with the reviews.

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d-eggert commented Apr 7, 2024

@srmnitc The publication looks interesting, but I have no time available at the moment, sorry.

@rogerkuou
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@srmnitc Thanks a lot! No problem, just take the time you need.
@KwickSilver and @abhishektiwari Thanks for taking time to review this paper!

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srmnitc commented Apr 8, 2024

@KwickSilver and @abhishektiwari thanks for agreeing to be reviewers. I will now start the review thread.

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srmnitc commented Apr 8, 2024

@editorialbot start review

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OK, I've started the review over in #6591.

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