[PRE REVIEW]: WDPM: the Wetland DEM Ponding Model #2234

whedon · 2020-05-23T12:02:54Z

Submitting author: @KevinShook (Kevin Shook)
Repository: https://github.com/CentreForHydrology/WDPM
Version: v1.0.0
Editor: @kbarnhart
Reviewers: @r-barnes, @awickert, @KCallaghan
Managing EiC: Arfon Smith

⚠️ JOSS reduced service mode ⚠️

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

Author instructions

Thanks for submitting your paper to JOSS @KevinShook. Currently, there isn't an JOSS editor assigned to your paper.

@KevinShook if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). In addition, this list of people have already agreed to review for JOSS and may be suitable for this submission (please start at the bottom of the list).

Editor instructions

The JOSS submission bot @whedon is here to help you find and assign reviewers and start the main review. To find out what @whedon can do for you type:

@whedon commands

The text was updated successfully, but these errors were encountered:

whedon · 2020-05-23T12:02:57Z

Hello human, I'm @whedon, a robot that can help you with some common editorial tasks.

⚠️ JOSS reduced service mode ⚠️

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

For a list of things I can do to help you, just type:

@whedon commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@whedon generate pdf

whedon · 2020-05-23T12:03:06Z

Software report (experimental):

github.com/AlDanial/cloc v 1.84  T=0.13 s (60.7 files/s, 42276.6 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
C                                2            296            208           3294
Python                           1             82            251           1028
OpenCL                           1             23              6            156
TeX                              1             10              0             96
Markdown                         2             32              0             63
JSON                             1              0              0             23
-------------------------------------------------------------------------------
SUM:                             8            443            465           4660
-------------------------------------------------------------------------------


Statistical information for the repository '2234' was gathered on 2020/05/23.
The following historical commit information, by author, was found:

Author                     Commits    Insertions      Deletions    % of changes
Kevin Shook                      1          5159              0          100.00

Below are the number of rows from each author that have survived and are still
intact in the current revision:

Author                     Rows      Stability          Age       % in comments
Kevin Shook                5159          100.0          0.0                9.01

whedon · 2020-05-23T12:03:15Z

Reference check summary:

OK DOIs

- 10.1002/hyp.8381 is OK
- 10.1002/hyp.9867 is OK
- 10.1016/j.jhydrol.2014.12.014 is OK
- 10.1016/S0022-1694(03)00175-6 is OK

MISSING DOIs

- None

INVALID DOIs

- 10.1002/hyp is INVALID

whedon · 2020-05-23T12:03:34Z

👉 Check article proof 📄 👈

arfon · 2020-05-23T12:04:08Z

👋 @KevinShook - Thanks for your submission to JOSS. As described in our blog post announcing the reopening of JOSS, we're currently working in a "reduced service mode", limiting the number of papers assigned to any individual editor.

Since reopening JOSS earlier in the week we've had > 50 papers submitted and as such, yours has been put in our backlog that we will be working through over the coming weeks and months.

Thanks in advance for your patience!

KevinShook · 2020-05-23T18:46:46Z

@whedon commands

whedon · 2020-05-23T18:46:49Z

Here are some things you can ask me to do:

# List Whedon's capabilities
@whedon commands

# List of editor GitHub usernames
@whedon list editors

# List of reviewers together with programming language preferences and domain expertise
@whedon list reviewers

EDITORIAL TASKS

# Compile the paper
@whedon generate pdf

# Compile the paper from alternative branch
@whedon generate pdf from branch custom-branch-name

# Ask Whedon to check the references for missing DOIs
@whedon check references

# Ask Whedon to check repository statistics for the submitted software
@whedon check repository

KevinShook · 2020-05-23T18:47:29Z

@whedon generate pdf

whedon · 2020-05-23T18:48:02Z

👉 Check article proof 📄 👈

KevinShook · 2020-05-23T18:59:15Z

@whedon generate proof

whedon · 2020-05-23T18:59:17Z

I'm sorry human, I don't understand that. You can see what commands I support by typing:

@whedon commands

KevinShook · 2020-05-23T18:59:37Z

@whedon generate pdf

whedon · 2020-05-23T19:00:07Z

👉 Check article proof 📄 👈

KevinShook · 2020-05-23T19:01:24Z

@whedon check references

whedon · 2020-05-23T19:01:47Z

Reference check summary:

OK DOIs

- 10.1002/hyp.6787 is OK
- 10.1002/hyp.8381 is OK
- 10.1002/hyp.9867 is OK
- 10.1016/j.jhydrol.2014.12.014 is OK
- 10.1016/S0022-1694(03)00175-6 is OK

MISSING DOIs

- None

INVALID DOIs

- None

KevinShook · 2020-05-23T19:03:13Z

@whedon check repository

whedon · 2020-05-23T19:03:25Z

Software report (experimental):

github.com/AlDanial/cloc v 1.84  T=0.08 s (97.4 files/s, 67783.6 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
C                                2            296            208           3294
Python                           1             82            251           1028
OpenCL                           1             23              6            156
TeX                              1             10              0             96
Markdown                         2             32              0             63
JSON                             1              0              0             23
-------------------------------------------------------------------------------
SUM:                             8            443            465           4660
-------------------------------------------------------------------------------


Statistical information for the repository '2234' was gathered on 2020/05/23.
The following historical commit information, by author, was found:

Author                     Commits    Insertions      Deletions    % of changes
Kevin Shook                      1          5159              0          100.00

Below are the number of rows from each author that have survived and are still
intact in the current revision:

Author                     Rows      Stability          Age       % in comments
Kevin Shook                5159          100.0          0.0                9.01

KevinShook · 2020-05-23T19:13:26Z

@whedon generate pdf

whedon · 2020-05-23T19:14:19Z

👉 Check article proof 📄 👈

KevinShook · 2020-05-25T17:27:15Z

@whedon generate pdf

whedon · 2020-05-25T17:27:49Z

👉 Check article proof 📄 👈

kbarnhart · 2020-05-28T15:52:38Z

@openjournals/joss-eics I can handle this one.

kbarnhart · 2020-05-28T15:52:48Z

@whedon assign @kbarnhart as editor

whedon · 2020-05-28T15:52:53Z

OK, the editor is @kbarnhart

kbarnhart · 2020-05-29T23:30:41Z

@whedon add @awickert as reviewer

whedon · 2020-05-29T23:30:46Z

OK, @awickert is now a reviewer

kbarnhart · 2020-05-29T23:31:26Z

@whedon add @KCallaghan as reviewer

whedon · 2020-05-29T23:31:31Z

OK, @KCallaghan is now a reviewer

kbarnhart · 2020-05-29T23:32:44Z

@whedon start review

whedon · 2020-05-29T23:32:49Z

OK, I've started the review over in #2276.

KevinShook · 2021-02-22T22:18:15Z

@whedon generate pdf

whedon · 2021-02-22T22:18:48Z

PDF failed to compile for issue #2234 with the following error:

/app/vendor/ruby-2.6.6/lib/ruby/2.6.0/psych.rb:456:in parse': (a61e06cd2a4edf93b9d570d2/paper/paper.md): found a tab character that violate intendation while scanning a plain scalar at line 18 column 18 (Psych::SyntaxError) from /app/vendor/ruby-2.6.6/lib/ruby/2.6.0/psych.rb:456:in parse_stream'
from /app/vendor/ruby-2.6.6/lib/ruby/2.6.0/psych.rb:390:in parse' from /app/vendor/ruby-2.6.6/lib/ruby/2.6.0/psych.rb:277:in load'
from /app/vendor/ruby-2.6.6/lib/ruby/2.6.0/psych.rb:578:in block in load_file' from /app/vendor/ruby-2.6.6/lib/ruby/2.6.0/psych.rb:577:in open'
from /app/vendor/ruby-2.6.6/lib/ruby/2.6.0/psych.rb:577:in load_file' from /app/vendor/bundle/ruby/2.6.0/bundler/gems/whedon-92346a0773a4/lib/whedon.rb:127:in load_yaml'
from /app/vendor/bundle/ruby/2.6.0/bundler/gems/whedon-92346a0773a4/lib/whedon.rb:87:in initialize' from /app/vendor/bundle/ruby/2.6.0/bundler/gems/whedon-92346a0773a4/lib/whedon/processor.rb:38:in new'
from /app/vendor/bundle/ruby/2.6.0/bundler/gems/whedon-92346a0773a4/lib/whedon/processor.rb:38:in set_paper' from /app/vendor/bundle/ruby/2.6.0/bundler/gems/whedon-92346a0773a4/bin/whedon:58:in prepare'
from /app/vendor/bundle/ruby/2.6.0/gems/thor-0.20.3/lib/thor/command.rb:27:in run' from /app/vendor/bundle/ruby/2.6.0/gems/thor-0.20.3/lib/thor/invocation.rb:126:in invoke_command'
from /app/vendor/bundle/ruby/2.6.0/gems/thor-0.20.3/lib/thor.rb:387:in dispatch' from /app/vendor/bundle/ruby/2.6.0/gems/thor-0.20.3/lib/thor/base.rb:466:in start'
from /app/vendor/bundle/ruby/2.6.0/bundler/gems/whedon-92346a0773a4/bin/whedon:131:in <top (required)>' from /app/vendor/bundle/ruby/2.6.0/bin/whedon:23:in load'
from /app/vendor/bundle/ruby/2.6.0/bin/whedon:23:in `

'

KevinShook · 2021-02-22T22:22:36Z

@whedon generate pdf

whedon · 2021-02-22T22:23:40Z

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

KevinShook · 2021-02-22T22:33:33Z

@whedon generate pdf

whedon · 2021-02-22T22:34:33Z

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

kthyng · 2021-02-23T16:19:33Z

Hi @KevinShook! You can test out your paper compilation, see here: https://joss.readthedocs.io/en/latest/submitting.html#checking-that-your-paper-compiles

KevinShook · 2021-02-23T16:21:16Z

Thanks - wasn't sure where to be running the whedon commands

kthyng · 2021-02-23T16:22:37Z

You can always just run the generate pdf command in the review issue too.

whedon added the pre-review label May 23, 2020

whedon added C Python TeX labels May 23, 2020

arfon added the waitlisted Submissions in the JOSS backlog due to reduced service mode. label May 23, 2020

whedon assigned kbarnhart May 28, 2020

whedon assigned kbarnhart and r-barnes May 29, 2020

whedon assigned awickert, kbarnhart and r-barnes and unassigned r-barnes and kbarnhart May 29, 2020

whedon assigned awickert and kbarnhart and unassigned awickert, r-barnes and kbarnhart May 29, 2020

whedon assigned KCallaghan and r-barnes May 29, 2020

whedon closed this as completed May 29, 2020

[PRE REVIEW]: WDPM: the Wetland DEM Ponding Model #2234

[PRE REVIEW]: WDPM: the Wetland DEM Ponding Model #2234

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edited

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